RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 NFATC3Q12968 1075 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 TRMT10CQ7L0Y3 403 aaKnown RBP19.73■□□□□ 0.75
VARS-218ENST00000459667 TAOK1Q7L7X3 1001 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 TMPRSS11BQ86T26 416 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 ASPGQ86U10 573 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 TMEM151BQ8IW70 566 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 KLHDC8AQ8IYD2 350 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 TBC1D19Q8N5T2 526 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 MFSD9Q8NBP5 474 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 CAMKVQ8NCB2 501 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 SLC44A1Q8WWI5 657 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 EXT2Q93063 718 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 MMABQ96EY8 250 aaPredicted RBP19.73■□□□□ 0.75
VARS-218ENST00000459667 IP6K3Q96PC2 410 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 PAFAH2Q99487 392 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 TMEM79Q9BSE2 394 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 SARGQ9BW04 601 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 TRIM55Q9BYV6 548 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 ING2Q9H160 280 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 SOX17Q9H6I2 414 aaPredicted RBP19.73■□□□□ 0.75
VARS-218ENST00000459667 ALG9Q9H6U8 611 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 PELI2Q9HAT8 420 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 NMRAL1Q9HBL8 299 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 CD274Q9NZQ7 290 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 ZNF282Q9UDV7 671 aaPredicted RBP19.73■□□□□ 0.75
VARS-218ENST00000459667 ACOT9Q9Y305 439 aa19.73■□□□□ 0.75
VARS-218ENST00000459667 MRPS2Q9Y399 296 aaKnown RBP19.73■□□□□ 0.75
VARS-218ENST00000459667 A0A087X1B8 175 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 A0A0A6YYC8 382 aaPredicted RBP19.72■□□□□ 0.75
VARS-218ENST00000459667 TRBC2A0A5B9 178 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 I3L1I5 382 aaPredicted RBP19.72■□□□□ 0.75
VARS-218ENST00000459667 FOXS1O43638 330 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 OR1F1O43749 312 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 S100BP04271 92 aaPredicted RBP19.72■□□□□ 0.75
VARS-218ENST00000459667 C2P06681 752 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 SLC35G6P0C7Q6 338 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 OCA2Q04671 838 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 DSG2Q14126 1118 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 FAM53BQ14153 422 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 CDKL4Q5MAI5 379 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 SULT1C3Q6IMI6 304 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 SHISA6Q6ZSJ9 500 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 CCDC91Q7Z6B0 441 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 TMEM102Q8N9M5 508 aaPredicted RBP19.72■□□□□ 0.75
VARS-218ENST00000459667 UHMK1Q8TAS1 419 aaKnown RBP19.72■□□□□ 0.75
VARS-218ENST00000459667 STAG3L4Q8TBR4 150 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 KCTD4Q8WVF5 259 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 SLC13A3Q8WWT9 602 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 PCSK5Q92824 1860 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 TM4SF19Q96DZ7 209 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 MACROD1Q9BQ69 325 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 SPNS1Q9H2V7 528 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 CNOT10Q9H9A5 744 aaKnown RBP19.72■□□□□ 0.75
VARS-218ENST00000459667 IGSF5Q9NSI5 407 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 KALRNO60229 2985 aa19.72■□□□□ 0.75
VARS-218ENST00000459667 VSTM2BA6NLU5 285 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 PEX12O00623 359 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 TAPBPO15533 448 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 IPO13O94829 963 aaKnown RBP19.71■□□□□ 0.75
VARS-218ENST00000459667 SLU7O95391 586 aaKnown RBP19.71■□□□□ 0.75
VARS-218ENST00000459667 ALDOAP04075 364 aaKnown RBP19.71■□□□□ 0.75
VARS-218ENST00000459667 TYK2P29597 1187 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 AVPR1BP47901 424 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 CSRP3P50461 194 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 RRADP55042 308 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 REEP5Q00765 189 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 IRF9Q00978 393 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 NXPE4Q6UWF7 544 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 MED25Q71SY5 747 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 PPP1R32Q7Z5V6 425 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 ISCA2Q86U28 154 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 CENPLQ8N0S6 344 aaPredicted RBP19.71■□□□□ 0.75
VARS-218ENST00000459667 PDPRQ8NCN5 879 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 ZNF740Q8NDX6 193 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 ZCCHC10Q8TBK6 192 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 STT3BQ8TCJ2 826 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.71■□□□□ 0.75
VARS-218ENST00000459667 MIEF2Q96C03 454 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 NXNL1Q96CM4 212 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 AIF1LQ9BQI0 150 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 YIPF2Q9BWQ6 316 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 ZNF71Q9NQZ8 489 aaPredicted RBP19.71■□□□□ 0.75
VARS-218ENST00000459667 TRPC4Q9UBN4 977 aa19.71■□□□□ 0.75
VARS-218ENST00000459667 A0A096LPK6 155 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 POC1B-GALNT4F8VUJ3 575 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 FFAR3O14843 346 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 GPR42O15529 346 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 NDUFS4O43181 175 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 KERAO60938 352 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 ABHD2P08910 425 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 GNAZP19086 355 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 MMP11P24347 488 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 TNFRSF8P28908 595 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 GGT5P36269 586 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 MSH2P43246 934 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 KCNC1P48547 511 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 HSPA7P48741 367 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 SERPINB9P50453 376 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 CCL11P51671 97 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 SNRPNP63162 240 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms