RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 VWA2Q5GFL6 755 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 MFSD4BQ5TF39 518 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 FAAH2Q6GMR7 532 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 PRMT9Q6P2P2 845 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 VN1R4Q7Z5H5 301 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 ASPGQ86U10 573 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 TBC1D19Q8N5T2 526 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 SNX31Q8N9S9 440 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 LRRN4CLQ8ND94 238 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 ZNF740Q8NDX6 193 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 OR9A4Q8NGU2 314 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 ESAMQ96AP7 390 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 MIEF2Q96C03 454 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 CRB3Q9BUF7 120 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 SLC25A23Q9BV35 468 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 TRIM4Q9C037 500 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 ALG9Q9H6U8 611 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 ZNF282Q9UDV7 671 aaPredicted RBP17.78■□□□□ 0.44
USP39-209ENST00000458268 IKBKGQ9Y6K9 419 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 NUP210LQ5VU65 1888 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 PRPF4O43172 522 aaKnown RBP eCLIP17.77■□□□□ 0.44
USP39-209ENST00000458268 NDUFS4O43181 175 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 INHBAP08476 426 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 SLC35G6P0C7Q6 338 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 TFEBP19484 476 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 VARSP26640 1264 aaKnown RBP17.77■□□□□ 0.44
USP39-209ENST00000458268 AVPR1BP47901 424 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 GLRBP48167 497 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 HSPA7P48741 367 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 RRADP55042 308 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 ATP6V0D1P61421 351 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 ZKSCAN8Q15776 578 aaPredicted RBP17.77■□□□□ 0.44
USP39-209ENST00000458268 TEX35Q5T0J7 233 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 ASB18Q6ZVZ8 466 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 PRSS41Q7RTY9 318 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 PPP1R32Q7Z5V6 425 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 IFT20Q8IY31 132 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 CAMKVQ8NCB2 501 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 STT3BQ8TCJ2 826 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 KCTD4Q8WVF5 259 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 SLC13A3Q8WWT9 602 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 ANKRD7Q92527 254 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 SPSB2Q99619 263 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 FAM129AQ9BZQ8 928 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 TSPYL1Q9H0U9 437 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 SPNS1Q9H2V7 528 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 P4HTMQ9NXG6 502 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 HCN3Q9P1Z3 774 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 TUBD1Q9UJT1 453 aa17.77■□□□□ 0.44
USP39-209ENST00000458268 G3BP2Q9UN86 482 aaKnown RBP17.77■□□□□ 0.44
USP39-209ENST00000458268 SCN2AQ99250 2005 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 ZNF860A6NHJ4 632 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 CLGNO14967 610 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 WISP3O95389 354 aaPredicted RBP17.76■□□□□ 0.43
USP39-209ENST00000458268 ALBP02768 609 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 SLC35E2BP0CK96 405 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 CRABP2P29373 138 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 ECHS1P30084 290 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 HNF4AP41235 474 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 HNMTP50135 292 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 SNRPNP63162 240 aaKnown RBP17.76■□□□□ 0.43
USP39-209ENST00000458268 CDKL1Q00532 357 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 KLC1Q07866 573 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 GARNL3Q5VVW2 1013 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 APLFQ8IW19 511 aaPredicted RBP17.76■□□□□ 0.43
USP39-209ENST00000458268 GSPT2Q8IYD1 628 aaKnown RBP17.76■□□□□ 0.43
USP39-209ENST00000458268 MFSD9Q8NBP5 474 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 CLEC1AQ8NC01 280 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 KCT2Q8NC54 265 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 CCT6BQ92526 530 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 RHBDF1Q96CC6 855 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 VPS11Q9H270 941 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 ACSS3Q9H6R3 686 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 WDR54Q9H977 334 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 SNX15Q9NRS6 342 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 NXT1Q9UKK6 140 aaKnown RBP17.76■□□□□ 0.43
USP39-209ENST00000458268 KCNE2Q9Y6J6 123 aa17.76■□□□□ 0.43
USP39-209ENST00000458268 SGK494L7N484 410 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 FOXS1O43638 330 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 CCNT2O60583 730 aaKnown RBP17.75■□□□□ 0.43
USP39-209ENST00000458268 LTA4HP09960 611 aaKnown RBP17.75■□□□□ 0.43
USP39-209ENST00000458268 ZGLP1P0C6A0 271 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 TYK2P29597 1187 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 PGDP52209 483 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 DLG1Q12959 904 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 DSG2Q14126 1118 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 MED25Q71SY5 747 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 TMEM102Q8N9M5 508 aaPredicted RBP17.75■□□□□ 0.43
USP39-209ENST00000458268 NXNL1Q96CM4 212 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 THAP11Q96EK4 314 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 MOCOSQ96EN8 888 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 IP6K3Q96PC2 410 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 AIF1LQ9BQI0 150 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 TMEM79Q9BSE2 394 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 RBCK1Q9BYM8 510 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 PELI2Q9HAT8 420 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 NMRAL1Q9HBL8 299 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 ANKHQ9HCJ1 492 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 C3orf18Q9UK00 162 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 FBXL4Q9UKA2 621 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms