RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 BCKDHAP12694 445 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 MAGP20916 626 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 PRPH2P23942 346 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 CSF2RBP32927 897 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 HNF4AP41235 474 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 KRT6CP48668 564 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 MRPL19P49406 292 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 ATP4BP51164 291 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 AFF3P51826 1226 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 DGKQP52824 942 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 GFERP55789 205 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 ERVK-8P63133 956 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 EMX2Q04743 252 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 PRDX1Q06830 199 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 CYP4F3Q08477 520 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 GRIK2Q13002 908 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 CUL3Q13618 768 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 KRT33BQ14525 404 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 PAGE3Q5JUK9 113 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 WDR45BQ5MNZ6 344 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 NKAIN2Q5VXU1 208 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 REP15Q6BDI9 236 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 ANKRD26P1Q6NSI1 321 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 MED27Q6P2C8 311 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 CYP20A1Q6UW02 462 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 DCP2Q8IU60 420 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 AFAP1L2Q8N4X5 818 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 C1orf52Q8N6N3 182 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 FNDC5Q8NAU1 212 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 PROKR1Q8TCW9 393 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 CREB3L4Q8TEY5 395 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 SETD7Q8WTS6 366 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 CHTF18Q8WVB6 975 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 VPS33AQ96AX1 596 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 ZC3H10Q96K80 434 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 TSSK3Q96PN8 268 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 F2RL3Q96RI0 385 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 DPH7Q9BTV6 452 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 BRINP2Q9C0B6 783 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 ABCG4Q9H172 646 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 SRMSQ9H3Y6 488 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 ELOVL6Q9H5J4 265 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 CAPN10Q9HC96 672 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 FAM60AQ9NP50 221 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 SLC6A13Q9NSD5 602 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 POT1Q9NUX5 634 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 C1orf109Q9NX04 203 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 CCDC167Q9P0B6 97 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 TMEM9Q9P0T7 183 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 SLAMF8Q9P0V8 285 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 LNPEPQ9UIQ6 1025 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 STK38LQ9Y2H1 464 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 GOLGA4Q13439 2230 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 SCN3AQ9NY46 2000 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 LOC105369274A0A096LPK9 316 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 KIR2DS5A0A0G2JLQ3 304 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 A0A0G2JNG1 304 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 LOC102723532A0A0G2JNH3 316 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 WASHC1A8K0Z3 465 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 B2RBV5 119 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 LMO7DNF2Z398 122 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 KIR2DS3K7RE56 304 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 SLC28A1O00337 649 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 PLPP1O14494 284 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 GIPC1O14908 333 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 SEC22BO75396 215 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 EEDO75530 441 aaKnown RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 PRKRAO75569 313 aaKnown RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 DNAJC8O75937 253 aaPredicted RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 KIAA0754O94854 1291 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 LRATO95237 230 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 VIPP01282 170 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 RPN2P04844 631 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 EZRP15311 586 aaKnown RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 ST6GAL1P15907 406 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 EFNA1P20827 205 aaPredicted RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 EPHA8P29322 1005 aaPredicted RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 SHMT2P34897 504 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 C21orf59P57076 290 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 CORO7P57737 925 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 HHEXQ03014 270 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 CSTF3Q12996 717 aaKnown RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 KIR2DS5Q14953 304 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 HERC3Q15034 1050 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 PLCL1Q15111 1095 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 RBBP5Q15291 538 aaKnown RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 TLR1Q15399 786 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 DEFB110Q30KQ9 67 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 HLA-BQ31612 363 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 GTDC1Q4AE62 458 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 VPS26BQ4G0F5 336 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 PDCD4Q53EL6 469 aaKnown RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 ZNF385BQ569K4 471 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 C8orf82Q6P1X6 216 aaPredicted RBP8.36□□□□□ -1.07
RIF1-208ENST00000457745 FBXO42Q6P3S6 717 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 SLC2A7Q6PXP3 512 aa8.36□□□□□ -1.07
RIF1-208ENST00000457745 ZNF793Q6ZN11 406 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms