RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ANKRD30BQ9BXX2 1392 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 AOX1Q06278 1338 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 WDR17Q8IZU2 1322 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PCDH11XQ9BZA7 1347 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PCDH11YQ9BZA8 1340 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 KDM3AQ9Y4C1 1321 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 C10orf71Q711Q0 1435 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ANKARQ7Z5J8 1434 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 VPS8Q8N3P4 1428 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PNMA6EA0A0J9YXQ4 647 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 GNG14A0A1W2PPG7 69 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 MEX3AA1L020 520 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 UBE2QL1A1L167 161 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 C2orf78A6NCI8 922 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 LRRC53A6NM62 1247 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 BECN2A8MW95 431 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TCP11X1B4DZS4 312 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 E7ESA3 106 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 H7C1D1 291 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 BCAT2O15382 392 aaPredicted RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 PJA2O43164 708 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PSMD3O43242 534 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 CDH16O75309 829 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 MATN4O95460 622 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SNAP29O95721 258 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 KLKB1P03952 638 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 CALB1P05937 261 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SERPINA6P08185 405 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 CD3GP09693 182 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TUBG1P23258 451 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 CYP2F1P24903 491 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TACR3P29371 465 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 MC5RP33032 325 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 NUDT1P36639 197 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 IST1P53990 364 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 BCAT1P54687 386 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 RAD23BP54727 409 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ADAM8P78325 824 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 OCA2Q04671 838 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SCAPQ12770 1279 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PTP4A2Q12974 167 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PPIGQ13427 754 aaKnown RBP eCLIP5.23□□□□□ -1.578e-9■□□□□ 9.9
VPS41-209ENST00000457055 TDGQ13569 410 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ZNF273Q14593 569 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 MVPQ14764 893 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 PDK2Q15119 407 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TEX44Q53QW1 395 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 C3orf38Q5JPI3 329 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 LIPNQ5VXI9 398 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 CWC27Q6UX04 472 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 Q6ZPA2 131 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 RBPMS2Q6ZRY4 209 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 KCTD8Q6ZWB6 473 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 RNF44Q7L0R7 432 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TAS1R1Q7RTX1 841 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ZNF551Q7Z340 670 aaPredicted RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 RTN4RL2Q86UN3 420 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ITIH5Q86UX2 942 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SERINC5Q86VE9 423 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ZFAND4Q86XD8 727 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PLD3Q8IV08 490 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ZDHHC21Q8IVQ6 265 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 LRRC8AQ8IWT6 810 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 BBS7Q8IWZ6 715 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 GSPT2Q8IYD1 628 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 ENTHD1Q8IYW4 607 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SELENOHQ8IZQ5 122 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 FAM58AQ8N1B3 248 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TRAM1L1Q8N609 369 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PI4KAP1Q8N8J0 262 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 MLKLQ8NB16 471 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 UXS1Q8NBZ7 420 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 OR7G3Q8NG95 312 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 RP9Q8TA86 221 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 DNAJB14Q8TBM8 379 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SLC2A14Q8TDB8 520 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SETD7Q8WTS6 366 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 KCTD4Q8WVF5 259 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 RAB1CQ92928 201 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 NTAN1Q96AB6 310 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 C3orf49Q96BT1 292 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PERPQ96FX8 193 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 DUS3LQ96G46 650 aaKnown RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 OXNAD1Q96HP4 312 aaPredicted RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 CYP2S1Q96SQ9 504 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 OLFM1Q99784 485 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 IDI2Q9BXS1 227 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 PARD6GQ9BYG4 376 aaPredicted RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 GLIS2Q9BZE0 524 aaPredicted RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 OSBPL8Q9BZF1 889 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ZNF350Q9GZX5 532 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 MIS12Q9H081 205 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 RACGAP1Q9H0H5 632 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 POFUT1Q9H488 388 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 DPEP3Q9H4B8 488 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 FBXO44Q9H4M3 255 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 SLC32A1Q9H598 525 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 AUNIPQ9H7T9 357 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 AKIRIN1Q9H9L7 192 aaPredicted RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 RPF1Q9H9Y2 349 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms