RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ALKBH8Q96BT7 664 aaKnown RBP16.96■□□□□ 0.31
MSH6-207ENST00000456246 SARGQ9BW04 601 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 ILKAPQ9H0C8 392 aaPredicted RBP16.96■□□□□ 0.31
MSH6-207ENST00000456246 EPS8L2Q9H6S3 715 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 RIC8BQ9NVN3 520 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 PSAT1Q9Y617 370 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 DOCK10Q96BY6 2186 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 NSG1A0A0A6YYJ2 146 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 HEXBP07686 556 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 GSTA2P09210 222 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 CDH1P12830 882 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 SLC12A2P55011 1212 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 SKP1P63208 163 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 CDKL1Q00532 357 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 CAV1Q03135 178 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 UBAP2LQ14157 1087 aaKnown RBP16.95■□□□□ 0.3
MSH6-207ENST00000456246 TMEM214Q6NUQ4 689 aaKnown RBP16.95■□□□□ 0.3
MSH6-207ENST00000456246 NIPAL1Q6NVV3 410 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 SBSNQ6UWP8 590 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 IGFL2Q6UWQ7 119 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 CYS1Q717R9 158 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 NDUFAF7Q7L592 441 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 ADAMTSL2Q86TH1 951 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 FAM26EQ8N5C1 309 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 TM4SF19Q96DZ7 209 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 WDR77Q9BQA1 342 aaPredicted RBP16.95■□□□□ 0.3
MSH6-207ENST00000456246 RAB17Q9H0T7 212 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 TXNDC16Q9P2K2 825 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 UTP11Q9Y3A2 253 aaKnown RBP16.95■□□□□ 0.3
MSH6-207ENST00000456246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
MSH6-207ENST00000456246 CNTRLQ7Z7A1 2325 aa16.95■□□□□ 0.3
MSH6-207ENST00000456246 CLEC18AA5D8T8 446 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 RAD51CO43502 376 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 GUCA1CO95843 209 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 BCL6P41182 706 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 HNMTP50135 292 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 TAS2R39P59534 338 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 PPP1R3AQ16821 1122 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 CLEC18BQ6UXF7 455 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 RIPOR1Q6ZS17 1223 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 Q6ZS92 163 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 PARP9Q8IXQ6 854 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 KBTBD2Q8IY47 623 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 MFSD9Q8NBP5 474 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 CLEC18CQ8NCF0 446 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 OR4K1Q8NGD4 311 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 SLC13A3Q8WWT9 602 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 TSPAN17Q96FV3 270 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 DPH5Q9H2P9 285 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 ZNF160Q9HCG1 818 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 ANKHQ9HCJ1 492 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 SH2B3Q9UQQ2 575 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 SLC22A7Q9Y694 548 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 DOPEY2Q9Y3R5 2298 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 PRRC2CQ9Y520 2896 aaKnown RBP16.94■□□□□ 0.3
MSH6-207ENST00000456246 SHANK1Q9Y566 2161 aa16.94■□□□□ 0.3
MSH6-207ENST00000456246 LOC102723996A0A087X1L8 192 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 TRBC2A0A5B9 178 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 MASP2O00187 686 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 BMP10O95393 424 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 COX6A1P12074 109 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 ICAM2P13598 275 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 SAT1P21673 171 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 IL10P22301 178 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 POU4F1Q01851 419 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 CSHL1Q14406 222 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 HERC3Q15034 1050 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 PLEKHN1Q494U1 663 aaPredicted RBP16.93■□□□□ 0.3
MSH6-207ENST00000456246 ISLR2Q6UXK2 745 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 FRA10AC1Q70Z53 315 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 LAPTM4BQ86VI4 370 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 ZC3H7AQ8IWR0 971 aaKnown RBP16.93■□□□□ 0.3
MSH6-207ENST00000456246 OR9A4Q8NGU2 314 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 SLC5A11Q8WWX8 675 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 METTL21AQ8WXB1 218 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 PYCR2Q96C36 320 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 THOC3Q96J01 351 aaKnown RBP16.93■□□□□ 0.3
MSH6-207ENST00000456246 CPNE1Q99829 537 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 MCMBPQ9BTE3 642 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 GPAMQ9HCL2 828 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 SAYSD1Q9NPB0 183 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 LUZP4Q9P127 313 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 C19orf25Q9UFG5 118 aaPredicted RBP16.93■□□□□ 0.3
MSH6-207ENST00000456246 MKL2Q9ULH7 1088 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 DYRK1BQ9Y463 629 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 OARD1Q9Y530 152 aa16.93■□□□□ 0.3
MSH6-207ENST00000456246 RELNP78509 3460 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 SPENQ96T58 3664 aaKnown RBP16.92■□□□□ 0.3
MSH6-207ENST00000456246 IGHV1-45A0A0A0MS14 117 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 FEZF1A0PJY2 475 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 ALOX12BO75342 701 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 SERPINA7P05543 415 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 C8orf89P0DMQ9 161 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 C2orf54Q08AI8 447 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 MFAP5Q13361 173 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 PWP1Q13610 501 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 ZXDCQ2QGD7 858 aaPredicted RBP16.92■□□□□ 0.3
MSH6-207ENST00000456246 CRB2Q5IJ48 1285 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 TMEM205Q6UW68 189 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 TMEM207Q6UWW9 146 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms