RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 BCL6P41182 706 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 KCNC4Q03721 635 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 BMPR2Q13873 1038 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 FAM53BQ14153 422 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 ATG14Q6ZNE5 492 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 DTWD1Q8N5C7 304 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 EIF1ADQ8N9N8 165 aaKnown RBP16.5■□□□□ 0.23
USP39-208ENST00000455732 MFSD9Q8NBP5 474 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.5■□□□□ 0.23
USP39-208ENST00000455732 ISL2Q96A47 359 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 NACC2Q96BF6 587 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 TM4SF19Q96DZ7 209 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 IP6K3Q96PC2 410 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 SPSB2Q99619 263 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 RHOXF2Q9BQY4 288 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 ING2Q9H160 280 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 NMRAL1Q9HBL8 299 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 ZNF304Q9HCX3 659 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 SNX15Q9NRS6 342 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 IGSF5Q9NSI5 407 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 SLC22A14Q9Y267 594 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 DYRK1BQ9Y463 629 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 KCNE2Q9Y6J6 123 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 IGLV3-12A0A075B6K2 115 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 A0A087WUV0 522 aaPredicted RBP16.49■□□□□ 0.23
USP39-208ENST00000455732 TRBC2A0A5B9 178 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 ARGFXA6NJG6 315 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 PRPF4O43172 522 aaKnown RBP eCLIP16.49■□□□□ 0.23
USP39-208ENST00000455732 WISP1O95388 367 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 UMODP07911 640 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 INHBAP08476 426 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 OR1D4P47884 311 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 SERPINB8P50452 374 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 SERPINB9P50453 376 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 REEP5Q00765 189 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 DLG1Q12959 904 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 CHAF1BQ13112 559 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 DSG2Q14126 1118 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
USP39-208ENST00000455732 NKG7Q16617 165 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 NDUFA9Q16795 377 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 SULT1C3Q6IMI6 304 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 TRMT10CQ7L0Y3 403 aaKnown RBP16.49■□□□□ 0.23
USP39-208ENST00000455732 TAOK1Q7L7X3 1001 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 MRGPREQ86SM8 312 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 ISCA2Q86U28 154 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 TMEM151BQ8IW70 566 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 CENPLQ8N0S6 344 aaPredicted RBP16.49■□□□□ 0.23
USP39-208ENST00000455732 METTL27Q8N6F8 245 aaPredicted RBP16.49■□□□□ 0.23
USP39-208ENST00000455732 CAMKVQ8NCB2 501 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 STAG3L4Q8TBR4 150 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 MRRFQ96E11 262 aaKnown RBP16.49■□□□□ 0.23
USP39-208ENST00000455732 PAFAH2Q99487 392 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 TMEM79Q9BSE2 394 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 TRIM4Q9C037 500 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 DRC3Q9H069 523 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 CNOT10Q9H9A5 744 aaKnown RBP16.49■□□□□ 0.23
USP39-208ENST00000455732 MLXIPLQ9NP71 852 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 CTSFQ9UBX1 484 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 ZNF180Q9UJW8 692 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 ANAPC2Q9UJX6 822 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 RNF112Q9ULX5 631 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 ACOT9Q9Y305 439 aa16.49■□□□□ 0.23
USP39-208ENST00000455732 FEZF1A0PJY2 475 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 FOXS1O43638 330 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 LCMT2O60294 686 aaKnown RBP16.48■□□□□ 0.23
USP39-208ENST00000455732 KERAO60938 352 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 CEACAM4O75871 244 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 WDR47O94967 919 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 ALDOAP04075 364 aaKnown RBP16.48■□□□□ 0.23
USP39-208ENST00000455732 PDGFAP04085 211 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 C2P06681 752 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 TFEBP19484 476 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 FBLP22087 321 aaKnown RBP16.48■□□□□ 0.23
USP39-208ENST00000455732 CNTFP26441 200 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 GMPRP36959 345 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 MAGEA12P43365 314 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 FOXL2P58012 376 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 CATSPEREQ5SY80 951 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 TMEM214Q6NUQ4 689 aaKnown RBP16.48■□□□□ 0.23
USP39-208ENST00000455732 NXPE4Q6UWF7 544 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 ASPGQ86U10 573 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 TBC1D19Q8N5T2 526 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 TSNARE1Q96NA8 513 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 ATOH8Q96SQ7 321 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 TXLNGYQ9BZA5 131 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 ALG9Q9H6U8 611 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 ACSS2Q9NR19 701 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 WWOXQ9NZC7 414 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 GPRC5BQ9NZH0 403 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 NUDT4Q9NZJ9 180 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 ZNF282Q9UDV7 671 aaPredicted RBP16.48■□□□□ 0.23
USP39-208ENST00000455732 PCDHGA9Q9Y5G4 932 aaKnown RBP16.48■□□□□ 0.23
USP39-208ENST00000455732 MAU2Q9Y6X3 613 aa16.48■□□□□ 0.23
USP39-208ENST00000455732 PRRC2CQ9Y520 2896 aaKnown RBP16.48■□□□□ 0.23
USP39-208ENST00000455732 SPENQ96T58 3664 aaKnown RBP16.47■□□□□ 0.23
USP39-208ENST00000455732 NCF1BA6NI72 391 aaPredicted RBP16.47■□□□□ 0.23
USP39-208ENST00000455732 NCF1CA8MVU1 366 aaPredicted RBP16.47■□□□□ 0.23
USP39-208ENST00000455732 TAPBPO15533 448 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 IGHEP01854 428 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms