RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 DMRTC2Q8IXT2 367 aaPredicted RBP21.87■■□□□ 1.09
PTPRA-208ENST00000455631 MARVELD2Q8N4S9 558 aa21.87■■□□□ 1.09
PTPRA-208ENST00000455631 OR51Q1Q8NH59 317 aa21.87■■□□□ 1.09
PTPRA-208ENST00000455631 FAM57AQ8TBR7 257 aa21.87■■□□□ 1.09
PTPRA-208ENST00000455631 UCK2Q9BZX2 261 aa21.87■■□□□ 1.09
PTPRA-208ENST00000455631 ABCF3Q9NUQ8 709 aa21.87■■□□□ 1.09
PTPRA-208ENST00000455631 TCAF1Q9Y4C2 921 aa21.87■■□□□ 1.09
PTPRA-208ENST00000455631 ANKHD1Q8IWZ3 2542 aaKnown RBP21.86■■□□□ 1.09
PTPRA-208ENST00000455631 GOLGA6L9A6NEM1 432 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 ARHGEF33A8MVX0 844 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 HAT1O14929 419 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 NME2P1O60361 137 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 NSA2O95478 260 aaKnown RBP21.86■■□□□ 1.09
PTPRA-208ENST00000455631 NME2P22392 152 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 MSX1P28360 303 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 CHRNB4P30926 498 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 PTGS2P35354 604 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 GRIA1P42261 906 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 EIF3BP55884 814 aaKnown RBP21.86■■□□□ 1.09
PTPRA-208ENST00000455631 PRDX1Q06830 199 aaKnown RBP21.86■■□□□ 1.09
PTPRA-208ENST00000455631 TFF3Q07654 80 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 MYBPHQ13203 477 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 SFT2D3Q587I9 215 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 CES4AQ5XG92 561 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 VSTM4Q8IW00 320 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 MCOLN3Q8TDD5 553 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 ALG3Q92685 438 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 OLFM1Q99784 485 aa21.86■■□□□ 1.09
PTPRA-208ENST00000455631 PRRC2AP48634 2157 aaKnown RBP21.86■■□□□ 1.09
PTPRA-208ENST00000455631 A0A1B0GTH9 108 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 ERI2A8K979 691 aaKnown RBP21.85■■□□□ 1.09
PTPRA-208ENST00000455631 TFECO14948 347 aaPredicted RBP21.85■■□□□ 1.09
PTPRA-208ENST00000455631 CD3EAPO15446 510 aaKnown RBP21.85■■□□□ 1.09
PTPRA-208ENST00000455631 NDUFS3O75489 264 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 MATN4O95460 622 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 IL1RNP18510 177 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 KLK2P20151 261 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 ACTN3Q08043 901 aaPredicted RBP21.85■■□□□ 1.09
PTPRA-208ENST00000455631 ZNF468Q5VIY5 522 aaPredicted RBP21.85■■□□□ 1.09
PTPRA-208ENST00000455631 LRRC6Q86X45 466 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 CNGA4Q8IV77 575 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 PPFIBP2Q8ND30 876 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 PPHLN1Q8NEY8 458 aaKnown RBP21.85■■□□□ 1.09
PTPRA-208ENST00000455631 FAM136AQ96C01 138 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 LPAR4Q99677 370 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 FOXC2Q99958 501 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 CDCP1Q9H5V8 836 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 KCNJ16Q9NPI9 418 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 KCNN3Q9UGI6 736 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 RNF6Q9Y252 685 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 PCDHA13Q9Y5I0 950 aa21.85■■□□□ 1.09
PTPRA-208ENST00000455631 A0A1B0GTL3 188 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 E7EVH7 732 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 MYO1CO00159 1063 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 NDC80O14777 642 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 CDC40O60508 579 aaKnown RBP eCLIP21.84■■□□□ 1.09
PTPRA-208ENST00000455631 FAM155BO75949 473 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 ZWINTO95229 277 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 RPS3P23396 243 aaKnown RBP eCLIP21.84■■□□□ 1.09
PTPRA-208ENST00000455631 PNLIPRP1P54315 467 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 ARHGAP19Q14CB8 494 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 CTSL3PQ5NE16 218 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 TMEM211Q6ICI0 200 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 LGI4Q8N135 537 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 LILRB4Q8NHJ6 448 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 RBCK1Q9BYM8 510 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 CXXC4Q9H2H0 198 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 NIPBLQ6KC79 2804 aaeCLIP21.84■■□□□ 1.09
PTPRA-208ENST00000455631 ZNF469Q96JG9 3925 aaPredicted RBP21.84■■□□□ 1.09
PTPRA-208ENST00000455631 SCN3AQ9NY46 2000 aa21.84■■□□□ 1.09
PTPRA-208ENST00000455631 SGK494L7N484 410 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 CDC123O75794 336 aaPredicted RBP21.83■■□□□ 1.09
PTPRA-208ENST00000455631 TOXO94900 526 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 RELAQ04206 551 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 USP10Q14694 798 aaKnown RBP21.83■■□□□ 1.09
PTPRA-208ENST00000455631 ABRAXAS2Q15018 415 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 OTUD6BQ8N6M0 293 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 RND1Q92730 232 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 PEX13Q92968 403 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 PKP4Q99569 1192 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 ETNK1Q9HBU6 452 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 FAM114A2Q9NRY5 505 aa21.83■■□□□ 1.09
PTPRA-208ENST00000455631 CCM2LQ9NUG4 571 aaPredicted RBP21.83■■□□□ 1.09
PTPRA-208ENST00000455631 ZNF839A8K0R7 811 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 SMAPO00193 183 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 TPP2P29144 1249 aaPredicted RBP21.82■■□□□ 1.08
PTPRA-208ENST00000455631 ATP5DP30049 168 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 RFC3P40938 356 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 CYB561P49447 251 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 NAP1L1P55209 391 aaKnown RBP21.82■■□□□ 1.08
PTPRA-208ENST00000455631 SLC26A5P58743 744 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 FOLH1Q04609 750 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 NSDHLQ15738 373 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 RPS19BP1Q86WX3 136 aaKnown RBP21.82■■□□□ 1.08
PTPRA-208ENST00000455631 MPP5Q8N3R9 675 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 TMEM125Q96AQ2 219 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 EBNA1BP2Q99848 306 aaKnown RBP21.82■■□□□ 1.08
PTPRA-208ENST00000455631 GSX1Q9H4S2 264 aaPredicted RBP21.82■■□□□ 1.08
PTPRA-208ENST00000455631 HRH3Q9Y5N1 445 aa21.82■■□□□ 1.08
PTPRA-208ENST00000455631 AKR1B15C9JRZ8 316 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms