RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 TTC34A8MYJ7 566 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 ANKRD66B4E2M5 251 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 C2CD4DB7Z1M9 353 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 WASH3PC4AMC7 463 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 H3BQF6 201 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PRPF4O43172 522 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 MBTPS2O43462 519 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SOCS5O75159 536 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PIAS1O75925 651 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 POP4O95707 220 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 IGSF6O95976 241 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 GSRP00390 522 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 FGF1P05230 155 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TPOP07202 933 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 C8BP07358 591 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PDHA1P08559 390 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 MYZAPP0CAP1 466 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 VSIG10L2P0DP72 767 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 NMBRP28336 390 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 GCAP28676 217 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TRHRP34981 398 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CPOXP36551 454 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 MFAP4P55083 255 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM3BP58499 235 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 RPL26P61254 145 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SNRPD1P62314 119 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 EFNB1P98172 346 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PIGFQ07326 219 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 BCL2L1Q07817 233 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TRAF2Q12933 501 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SNTB1Q13884 538 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CCNIQ14094 377 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 POU6F1Q14863 301 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 AAK1Q2M2I8 961 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 KRT71Q3SY84 523 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 KBTBD12Q3ZCT8 623 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PLEKHN1Q494U1 663 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 ACCSLQ4AC99 568 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 HSP90B2PQ58FF3 399 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CARD16Q5EG05 197 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SPANXN3Q5MJ09 141 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CCDC144NLQ6NUI1 221 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 C22orf39Q6P5X5 142 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TRMT10BQ6PF06 316 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 DPY19L3Q6ZPD9 716 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 NLRP9Q7RTR0 991 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TDRPQ86YL5 185 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CAMK1DQ8IU85 385 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SFTPA1Q8IWL2 248 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC15A3Q8IY34 581 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR4N4Q8N0Y3 316 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC44A3Q8N4M1 653 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 DEFB123Q8N688 67 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PCDH20Q8N6Y1 951 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 IL17RCQ8NAC3 791 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 KDM1BQ8NB78 822 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR2AP1Q8NGE2 309 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR2A12Q8NGT7 310 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR6K2Q8NGY2 324 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 BRSK1Q8TDC3 778 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 DENND1AQ8TEH3 1009 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 DUSP19Q8WTR2 217 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TMEM171Q8WVE6 324 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PIH1D2Q8WWB5 315 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 KCNE4Q8WWG9 221 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CHFRQ96EP1 664 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PGM2Q96G03 612 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZNF778Q96MU6 729 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 GUCD1Q96NT3 240 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 DACH2Q96NX9 599 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 RANBP9Q96S59 729 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CCDC106Q9BWC9 280 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TDRD1Q9BXT4 1180 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 ADGRE3Q9BY15 652 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TM6SF2Q9BZW4 377 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CIPCQ9C0C6 399 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 CTDSP1Q9GZU7 261 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 C1orf21Q9H246 121 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 ATP13A3Q9H7F0 1226 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 KCNK12Q9HB15 430 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 MRM3Q9HC36 420 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 FBRSL1Q9HCM7 1045 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PRDM7Q9NQW5 492 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 THAP1Q9NVV9 213 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 IL1RAPL1Q9NZN1 696 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 OGFRQ9NZT2 677 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 VPS18Q9P253 973 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 FETUBQ9UGM5 382 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 LGALS13Q9UHV8 139 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC24A2Q9UI40 661 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 RPL26L1Q9UNX3 145 aaKnown RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 PLA2G4CQ9UP65 541 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC12A4Q9UP95 1085 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 BTBD3Q9Y2F9 522 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 UBE2J1Q9Y385 318 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 ADAM18Q9Y3Q7 739 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TCAF1Q9Y4C2 921 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 BPTFQ12830 3046 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 KNL1Q8NG31 2342 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms