RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 PDPK2PQ6A1A2 396 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 PLEKHA7Q6IQ23 1121 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 RHBDD2Q6NTF9 364 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 FBXO42Q6P3S6 717 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 FBXO38Q6PIJ6 1188 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 FAM180AQ6UWF9 173 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 B4GALNT4Q76KP1 1039 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 MON1BQ7L1V2 547 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 ZNF572Q7Z3I7 529 aaPredicted RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 LRRTM4Q86VH4 590 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 TGIF2LYQ8IUE0 185 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 PSTKQ8IV42 348 aaKnown RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 RHOT2Q8IXI1 618 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 PAF1Q8N7H5 531 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 GPR26Q8NDV2 337 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 SIMC1Q8NDZ2 872 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 CATSPER1Q8NEC5 780 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 ARRDC2Q8TBH0 407 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 SLC20A1Q8WUM9 679 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 ZFPM2Q8WW38 1151 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 GLYATL1Q969I3 302 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 PTERQ96BW5 349 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 CXorf40BQ96DE9 158 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 MTFMTQ96DP5 389 aaKnown RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 GBP5Q96PP8 586 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 PEBP4Q96S96 227 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 C17orf62Q9BQA9 187 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 ZSCAN5AQ9BUG6 496 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 SNRNP25Q9BV90 132 aaKnown RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 SELENOOQ9BVL4 669 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 TLR10Q9BXR5 811 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 STK33Q9BYT3 514 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 PITPNM3Q9BZ71 974 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 VPS16Q9H269 839 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 NDST4Q9H3R1 872 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 OSGEPL1Q9H4B0 414 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 ACTR5Q9H9F9 607 aaPredicted RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 ARFGAP3Q9NP61 516 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 ETNK2Q9NVF9 386 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 GPATCH2LQ9NWQ4 482 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 PKD2L2Q9NZM6 624 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 CWC15Q9P013 229 aaKnown RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 ADAM22Q9P0K1 906 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 EDARQ9UNE0 448 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 RPL26L1Q9UNX3 145 aaKnown RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 DNAJC16Q9Y2G8 782 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 RPH3AQ9Y2J0 694 aaPredicted RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 PADI2Q9Y2J8 665 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 NEU2Q9Y3R4 380 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 SVILO95425 2214 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 DIDO1Q9BTC0 2240 aaKnown RBP3.54□□□□□ -1.84
RBM39-220ENST00000455343 STAB1Q9NY15 2570 aa3.54□□□□□ -1.84
RBM39-220ENST00000455343 C1orf232A0A0U1RR37 186 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 TMEM150CB9EJG8 249 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 C9J4A7 227 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 E7EQ34 232 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 SOCS6O14544 535 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 ZNF749O43361 778 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 PRPSAP2O60256 369 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 MTX2O75431 263 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 WISP2O76076 250 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CLDN14O95500 239 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 ESRRBO95718 433 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CALB1P05937 261 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 ELANEP08246 267 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 HBQ1P09105 142 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CBSLP0DN79 551 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 ITGAMP11215 1152 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 AGXTP21549 392 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 ENPP1P22413 925 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 MST1P26927 711 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CXCR5P32302 372 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 PTPN7P35236 360 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CBSP35520 551 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 HALP42357 657 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 NSFP46459 744 aaKnown RBP3.53□□□□□ -1.84
RBM39-220ENST00000455343 GABRA4P48169 554 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 TNFSF10P50591 281 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CDH6P55285 790 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 FOXL2P58012 376 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CSNK1G2P78368 415 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 NIPAL4Q0D2K0 466 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 Q0VFX4 171 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 TMEM115Q12893 351 aaPredicted RBP3.53□□□□□ -1.84
RBM39-220ENST00000455343 MFAP5Q13361 173 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 MPP3Q13368 585 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 DPYSL2Q16555 572 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 LONRF1Q17RB8 773 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 ERCC6LQ2NKX8 1250 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 AGAP7PQ5VUJ5 663 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 MLIPQ5VWP3 458 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 KIRREL2Q6UWL6 708 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 TMEM207Q6UWW9 146 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 Q6ZPB1 254 aaPredicted RBP3.53□□□□□ -1.84
RBM39-220ENST00000455343 FAM83HQ6ZRV2 1179 aaPredicted RBP3.53□□□□□ -1.84
RBM39-220ENST00000455343 CDHR3Q6ZTQ4 885 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 OOSP2Q86WS3 158 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 LRRC49Q8IUZ0 686 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 CEP97Q8IW35 865 aa3.53□□□□□ -1.84
RBM39-220ENST00000455343 BBS5Q8N3I7 341 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms