RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 EHD1Q9H4M9 534 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 PSMC3IPQ9P2W1 217 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 TLK1Q9UKI8 766 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 PADI2Q9Y2J8 665 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 DYRK1BQ9Y463 629 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 ASB1Q9Y576 335 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 KCNE2Q9Y6J6 123 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 IKBKGQ9Y6K9 419 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 IGLV3-12A0A075B6K2 115 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 FEZF1A0PJY2 475 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 UBXN8O00124 270 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 FOXS1O43638 330 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 LCMT2O60294 686 aaKnown RBP13.49□□□□□ -0.25
HDAC4-205ENST00000454542 PRAMEF4O60810 478 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 KATNA1O75449 491 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 RFPL1O75677 317 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 SNRPAP09012 282 aaKnown RBP13.49□□□□□ -0.25
HDAC4-205ENST00000454542 PRKAR1AP10644 381 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 COL6A2P12110 1019 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 GRK3P35626 688 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 GDF5P43026 501 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 HSPA7P48741 367 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 PCDH1Q08174 1060 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 FAM53BQ14153 422 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 SOWAHCQ53LP3 525 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-205ENST00000454542 PRAMEF9Q5VWM5 478 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 TMEM214Q6NUQ4 689 aaKnown RBP13.49□□□□□ -0.25
HDAC4-205ENST00000454542 SLCO4C1Q6ZQN7 724 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 ASPGQ86U10 573 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 OR2Y1Q8NGV0 311 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-205ENST00000454542 MTBPQ96DY7 904 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 WDR54Q9H977 334 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 DNAJC11Q9NVH1 559 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 CD274Q9NZQ7 290 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 IFT80Q9P2H3 777 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-205ENST00000454542 RALYQ9UKM9 306 aaKnown RBP13.49□□□□□ -0.25
HDAC4-205ENST00000454542 POLHQ9Y253 713 aa13.49□□□□□ -0.25
HDAC4-205ENST00000454542 VSTM2BA6NLU5 285 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 SYCE1LA8MT33 242 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 STK16O75716 305 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 EIF2S1P05198 315 aaKnown RBP13.48□□□□□ -0.25
HDAC4-205ENST00000454542 UMODP07911 640 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 CD63P08962 238 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 PIM1P11309 404 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-205ENST00000454542 GNAZP19086 355 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 AHRP35869 848 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 GLRBP48167 497 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 MEF2AQ02078 507 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-205ENST00000454542 COL9A2Q14055 689 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-205ENST00000454542 DSG2Q14126 1118 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 ERV3-1Q14264 604 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 NAA30Q147X3 362 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-205ENST00000454542 SLC9A5Q14940 896 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 SETDB1Q15047 1291 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 RASA2Q15283 850 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 ATG9BQ674R7 924 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 C16orf46Q6P387 395 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 BORAQ6PGQ7 559 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 OVCH1Q7RTY7 1134 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 TDRPQ86YL5 185 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 AFAP1L2Q8N4X5 818 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 AMER3Q8N944 861 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 ANKRD53Q8N9V6 530 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 CAMKVQ8NCB2 501 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 ZNF740Q8NDX6 193 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 NT5CQ8TCD5 201 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 AENQ8WTP8 325 aaKnown RBP13.48□□□□□ -0.25
HDAC4-205ENST00000454542 EXTL1Q92935 676 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 EXT2Q93063 718 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 CABS1Q96KC9 395 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 CD244Q9BZW8 370 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 DRC3Q9H069 523 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 VPS11Q9H270 941 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 PPCSQ9HAB8 311 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 CTSFQ9UBX1 484 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 NDOR1Q9UHB4 597 aa13.48□□□□□ -0.25
HDAC4-205ENST00000454542 MRPS2Q9Y399 296 aaKnown RBP13.48□□□□□ -0.25
HDAC4-205ENST00000454542 CDC14CA4D256 554 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 SUPT3HB4E1H0 165 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 TK2O00142 265 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 MAP2K7O14733 419 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 SUPT3HO75486 399 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 NSA2O95478 260 aaKnown RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 S100BP04271 92 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 SHBGP04278 402 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 SLC35G6P0C7Q6 338 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 ALAS2P22557 587 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 VARSP26640 1264 aaKnown RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 GSTM2P28161 218 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 OR1D4P47884 311 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 AGTR2P50052 363 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 PWP1Q13610 501 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 NKG7Q16617 165 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 PDK4Q16654 411 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 FBXO48Q5FWF7 155 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 FAM69BQ5VUD6 431 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms