RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 SNURFLB1AK76 121 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 F8VVB4 439 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 F8VWA3 439 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 RENP00797 406 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 FAM200BP0CF97 657 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 AOC1P19801 751 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 GABRA5P31644 462 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 PSMB10P40306 273 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 VAMP7P51809 220 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 SRPXP78539 464 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 IGLV3-21P80748 117 aaPredicted RBP1.56□□□□□ -2.16
LRCH3-209ENST00000452660 ITGA7Q13683 1181 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 KIAA0141Q14154 515 aaPredicted RBP1.56□□□□□ -2.16
LRCH3-209ENST00000452660 TMEM132DQ14C87 1099 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 C9orf66Q5T8R8 295 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 REG3GQ6UW15 175 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 NHLRC1Q6VVB1 395 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 CLEC17AQ6ZS10 378 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 IKBIPQ70UQ0 350 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 GPC2Q8N158 579 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 RTL3Q8N8U3 475 aaKnown RBP1.56□□□□□ -2.16
LRCH3-209ENST00000452660 THAP8Q8NA92 274 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 NAXEQ8NCW5 288 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 SPPL2AQ8TCT8 520 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 USP6NLQ92738 828 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 CDCA3Q99618 268 aaPredicted RBP1.56□□□□□ -2.16
LRCH3-209ENST00000452660 APOL2Q9BQE5 337 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 SRSF8Q9BRL6 282 aaKnown RBP1.56□□□□□ -2.16
LRCH3-209ENST00000452660 Q9N2K0 584 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 PLAGL1Q9UM63 463 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 TMEM94Q12767 1356 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 NINLQ9Y2I6 1382 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 ATP10DQ9P241 1426 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 ABCC1P33527 1531 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 DIP2CQ9Y2E4 1556 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 IGHV3-16A0A0C4DH30 117 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 NEMP2A6NFY4 417 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 TXNL1O43396 289 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 ATP1B1P05026 303 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 HOXC4P09017 264 aaPredicted RBP1.55□□□□□ -2.16
LRCH3-209ENST00000452660 IRF2P14316 349 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 RGRP47804 291 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 KHKP50053 298 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 ATP4BP51164 291 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 DCDC1P59894 354 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 DHX8Q14562 1220 aaKnown RBP1.55□□□□□ -2.16
LRCH3-209ENST00000452660 RNASEH2BQ5TBB1 312 aaKnown RBP1.55□□□□□ -2.16
LRCH3-209ENST00000452660 SNX30Q5VWJ9 437 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 PRR27Q6MZM9 219 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 TMEM173Q86WV6 379 aaPredicted RBP1.55□□□□□ -2.16
LRCH3-209ENST00000452660 MMD2Q8IY49 270 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 PIGBQ92521 554 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 PIK3R3Q92569 461 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 SLC22A18Q96BI1 424 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 PPM1MQ96MI6 270 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 ITPAQ9BY32 194 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 MYOZ2Q9NPC6 264 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 NLGN3Q9NZ94 848 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 ABCD2Q9UBJ2 740 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 ABT1Q9ULW3 272 aaKnown RBP1.55□□□□□ -2.16
LRCH3-209ENST00000452660 CHKBQ9Y259 395 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 R4GN57 208 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 ATRNO75882 1429 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 SCAPERQ9BY12 1400 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 A2ML1A8K2U0 1454 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 GLI3P10071 1580 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 MAST1Q9Y2H9 1570 aa1.55□□□□□ -2.16
LRCH3-209ENST00000452660 NUP188Q5SRE5 1749 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 TNS1Q9HBL0 1735 aaKnown RBP1.54□□□□□ -2.16
LRCH3-209ENST00000452660 A0A087X0M5 115 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 A0A1B0GX30 115 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 NKX6-3A6NJ46 265 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 E9PAM4 449 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 K7ENM7 598 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 HMGB1P09429 215 aaKnown RBP1.54□□□□□ -2.16
LRCH3-209ENST00000452660 CLTBP09497 229 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 SMIM18P0DKX4 95 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 ATP1A3P13637 1013 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 RIDAP52758 137 aaKnown RBP1.54□□□□□ -2.16
LRCH3-209ENST00000452660 LBX1P52954 281 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 MFAP4P55083 255 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 TRAP1Q12931 704 aaKnown RBP1.54□□□□□ -2.16
LRCH3-209ENST00000452660 TMEM266Q2M3C6 531 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 GPR33Q49SQ1 333 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 OR4A47Q6IF82 309 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 ADGRD2Q7Z7M1 963 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 TMPRSS11BQ86T26 416 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 SLC22A15Q8IZD6 547 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 LGI2Q8N0V4 545 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 WDTC1Q8N5D0 677 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 OR52B6Q8NGF0 335 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 OR10S1Q8NGN2 331 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 MORC4Q8TE76 937 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 SSC4DQ8WTU2 575 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 PTPMT1Q8WUK0 201 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-209ENST00000452660 SFXN2Q96NB2 322 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 SEPHS2Q99611 448 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 TMX4Q9H1E5 349 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-209ENST00000452660 Q9H8V8 135 aa1.54□□□□□ -2.16
LRCH3-209ENST00000452660 MARCH7Q9H992 704 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms