RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 C18orf21Q32NC0 220 aaPredicted RBP11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 ATG9BQ674R7 924 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 TMEM214Q6NUQ4 689 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 CTAGE6Q86UF2 777 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 ZC3H7AQ8IWR0 971 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 AMER2Q8N7J2 671 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 Q8NA96 180 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 MFSD9Q8NBP5 474 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 KCT2Q8NC54 265 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 ZNF740Q8NDX6 193 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 OR9A4Q8NGU2 314 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 ANKRD7Q92527 254 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 C8orf44Q96CB5 159 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 THAP11Q96EK4 314 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 MOCOSQ96EN8 888 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 HAUS8Q9BT25 410 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 YIPF2Q9BWQ6 316 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 DRC3Q9H069 523 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 SPNS1Q9H2V7 528 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 CLMPQ9H6B4 373 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 ZDHHC18Q9NUE0 388 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 C3orf18Q9UK00 162 aa11.72□□□□□ -0.53
CSNK1E-211ENST00000451964 PHGDHO43175 533 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 JRKO75564 520 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 FAM155BO75949 473 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 SORBS2O94875 1100 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 GSTA2P09210 222 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 GMPRP36959 345 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 GP5P40197 560 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 CCR8P51685 355 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 EMP2P54851 167 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 POU4F1Q01851 419 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 AIMP2Q13155 320 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 KBTBD12Q3ZCT8 623 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 VWA5B1Q5TIE3 1220 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 JMJD6Q6NYC1 403 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 ASPGQ86U10 573 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 THOC6Q86W42 341 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 PDSS2Q86YH6 399 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 PARP9Q8IXQ6 854 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 SLC13A3Q8WWT9 602 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 SLC5A11Q8WWX8 675 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 CDKL2Q92772 493 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 NEIL2Q969S2 332 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 MIB2Q96AX9 1013 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 GPR22Q99680 433 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 RBBP8Q99708 897 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 CPNE1Q99829 537 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 SARGQ9BW04 601 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 TGIF2Q9GZN2 237 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 POPDC3Q9HBV1 291 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 LUZP4Q9P127 313 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 CTNNAL1Q9UBT7 734 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 SLC22A14Q9Y267 594 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 MAP4K5Q9Y4K4 846 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 OARD1Q9Y530 152 aa11.71□□□□□ -0.53
CSNK1E-211ENST00000451964 PRRC2CQ9Y520 2896 aaKnown RBP11.71□□□□□ -0.54
CSNK1E-211ENST00000451964 PABPN1LA6NDY0 278 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 TTLL8A6PVC2 850 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 IDSB3KWA1 339 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 SGK494L7N484 410 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 OR1F1O43749 312 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 DPM1O60762 260 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 DNAJB6O75190 326 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 NSA2O95478 260 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 ANXA5P08758 320 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 IL1RNP18510 177 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 ITGA3P26006 1051 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 GDF5P43026 501 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 SLC12A2P55011 1212 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 CDKL1Q00532 357 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 CKAP4Q07065 602 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 USP10Q14694 798 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 ZKSCAN8Q15776 578 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 NDUFA9Q16795 377 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 TUBB8Q3ZCM7 444 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 PLEKHN1Q494U1 663 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 SLC6A19Q695T7 634 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 IGFL3Q6UXB1 125 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 CTAGE3PQ8IX95 158 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 PPM1NQ8N819 430 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 NOA1Q8NC60 698 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 CAMKVQ8NCB2 501 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 FBF1Q8TES7 1133 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 RHBDF1Q96CC6 855 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 TSNARE1Q96NA8 513 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 DERL2Q9GZP9 239 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 MKKSQ9NPJ1 570 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 C5AR2Q9P296 337 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 G3BP2Q9UN86 482 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 CCDC88CQ9P219 2028 aa11.7□□□□□ -0.54
CSNK1E-211ENST00000451964 HEATR5BQ9P2D3 2071 aa11.69□□□□□ -0.54
CSNK1E-211ENST00000451964 TNRC6AQ8NDV7 1962 aaKnown RBP11.69□□□□□ -0.54
CSNK1E-211ENST00000451964 A0A1W2PQ72 361 aa11.69□□□□□ -0.54
CSNK1E-211ENST00000451964 TRBC2A0A5B9 178 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms