RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TAAR9Q96RI9 348 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 SPRTNQ9H040 489 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 EPN3Q9H201 632 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 NOL11Q9H8H0 719 aaKnown RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 IPPKQ9H8X2 491 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 FANCEQ9HB96 536 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 SEMA4BQ9NPR2 832 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 GEMIN8Q9NWZ8 242 aaKnown RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 FOXJ2Q9P0K8 574 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 RARRES3Q9UL19 164 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 B3GALT1Q9Y5Z6 326 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 SPEGQ15772 3267 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 HEATR5BQ9P2D3 2071 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 A0A1B0GTL3 188 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 TRBC2A0A5B9 178 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 C9orf172C9J069 976 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 H0YGG7 62 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 H3BMH7 237 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 PPP6CO00743 305 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 OR7A17O14581 309 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 POLR1CO15160 346 aaPredicted RBP12.46□□□□□ -0.41
VPS33A-202ENST00000451053 BRINP1O60477 761 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 KATNA1O75449 491 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 STATHP02808 62 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 HK2P52789 917 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 ITGA1P56199 1179 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 VSX2P58304 361 aaPredicted RBP12.46□□□□□ -0.41
VPS33A-202ENST00000451053 RAB15P59190 212 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 ARF3P61204 181 aaPredicted RBP12.46□□□□□ -0.41
VPS33A-202ENST00000451053 RPS15AP62244 130 aaKnown RBP12.46□□□□□ -0.41
VPS33A-202ENST00000451053 IRF8Q02556 426 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 RELAQ04206 551 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 PCDH1Q08174 1060 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 LCP2Q13094 533 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 TRAF3Q13114 568 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 IL11RAQ14626 422 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 DCAF12Q5T6F0 453 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 PRAMEF17Q5VTA0 474 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 PWWP2BQ6NUJ5 590 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 VN1R4Q7Z5H5 301 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 CPLX4Q7Z7G2 160 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 PPP1R3BQ86XI6 285 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 AFAP1L2Q8N4X5 818 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 OR52B6Q8NGF0 335 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 PTCD3Q96EY7 689 aaKnown RBP12.46□□□□□ -0.41
VPS33A-202ENST00000451053 SLC46A1Q96NT5 459 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 OR2A5Q96R48 311 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 AIF1LQ9BQI0 150 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 DDA1Q9BW61 102 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 ILKAPQ9H0C8 392 aaPredicted RBP12.46□□□□□ -0.41
VPS33A-202ENST00000451053 EHD1Q9H4M9 534 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 GSTO2Q9H4Y5 243 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 ASCL3Q9NQ33 180 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 STARD5Q9NSY2 213 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 ANGPTL2Q9UKU9 493 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 RAP2CQ9Y3L5 183 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 AK5Q9Y6K8 562 aa12.46□□□□□ -0.41
VPS33A-202ENST00000451053 CDRT15L2A8MXV6 281 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 P2RX6O15547 441 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 OR1F1O43749 312 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 EDF1O60869 148 aaKnown RBP12.45□□□□□ -0.42
VPS33A-202ENST00000451053 OR2B3O76000 313 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 WFS1O76024 890 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 DXOO77932 396 aaKnown RBP12.45□□□□□ -0.42
VPS33A-202ENST00000451053 EIF2S1P05198 315 aaKnown RBP12.45□□□□□ -0.42
VPS33A-202ENST00000451053 TROVE2P10155 538 aaKnown RBP eCLIP12.45□□□□□ -0.42
VPS33A-202ENST00000451053 RBMS1P29558 406 aaKnown RBP12.45□□□□□ -0.42
VPS33A-202ENST00000451053 SLC5A2P31639 672 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 GRK3P35626 688 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 CASP2P42575 452 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 CCR10P46092 362 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 CCNG1P51959 295 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 OCRLQ01968 901 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 CLCQ05315 142 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 E2F2Q14209 437 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 TBCCQ15814 346 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 RBBP7Q16576 425 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
VPS33A-202ENST00000451053 FAM219BQ5XKK7 198 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 CYB5D1Q6P9G0 228 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 IGF2-ASQ6U949 168 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 CEACAM20Q6UY09 585 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 FAM47EQ6ZV65 393 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 LRRC34Q8IZ02 419 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 ANKRD53Q8N9V6 530 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 MFSD9Q8NBP5 474 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 OR8K5Q8NH50 307 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 TRPC4APQ8TEL6 797 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 MAGEB10Q96LZ2 347 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF285Q96NJ3 590 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 MACROD1Q9BQ69 325 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 EFCAB11Q9BUY7 163 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 SARGQ9BW04 601 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 ACTR8Q9H981 624 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 FGFR1OP2Q9NVK5 253 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 SERTAD3Q9UJW9 196 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 RNF11Q9Y3C5 154 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms