RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CASQ1P31415 396 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 CCR8P51685 355 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 MRPS25P82663 173 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 MAT1AQ00266 395 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 EEF1A2Q05639 463 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 SRSF1Q07955 248 aaKnown RBP eCLIP14.49□□□□□ -0.09
CHD3-205ENST00000449744 FASTKD3Q14CZ7 662 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 Q6ZS92 163 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 NDUFAF7Q7L592 441 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 VN1R4Q7Z5H5 301 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 SLC26A11Q86WA9 606 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 ZC3H7AQ8IWR0 971 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 KBTBD2Q8IY47 623 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 NKAPQ8N5F7 415 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 TBC1D19Q8N5T2 526 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 OR9A4Q8NGU2 314 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 PPP4R1Q8TF05 950 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 PYROXD1Q8WU10 500 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 SLC13A3Q8WWT9 602 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 PYCR2Q96C36 320 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 FBXL8Q96CD0 374 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 SNRNP40Q96DI7 357 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 PDLIM5Q96HC4 596 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 VPS39Q96JC1 886 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 FAM129AQ9BZQ8 928 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 DPH5Q9H2P9 285 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 ANKHQ9HCJ1 492 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 MKL2Q9ULH7 1088 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 MRPS2Q9Y399 296 aaKnown RBP14.49□□□□□ -0.09
CHD3-205ENST00000449744 CLEC18AA5D8T8 446 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 TCP11X1B4DZS4 312 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 NSA2O95478 260 aaKnown RBP14.48□□□□□ -0.09
CHD3-205ENST00000449744 SLC35G6P0C7Q6 338 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 COX6A1P12074 109 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 ZNF37AP17032 561 aaPredicted RBP14.48□□□□□ -0.09
CHD3-205ENST00000449744 IL1RNP18510 177 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 BCL6P41182 706 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 SLC12A2P55011 1212 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 Q0VFX4 171 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 MFSD4BQ5TF39 518 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 TMEM214Q6NUQ4 689 aaKnown RBP14.48□□□□□ -0.09
CHD3-205ENST00000449744 CLEC18BQ6UXF7 455 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 ISLR2Q6UXK2 745 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 LINC00696Q6ZRV3 163 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 CAPN12Q6ZSI9 719 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 ZC3HC1Q86WB0 502 aaKnown RBP14.48□□□□□ -0.09
CHD3-205ENST00000449744 MFSD9Q8NBP5 474 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 CLEC18CQ8NCF0 446 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 SPATA4Q8NEY3 305 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 OR56A3Q8NH54 315 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 ZCCHC10Q8TBK6 192 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 DNAJB14Q8TBM8 379 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 METTL21AQ8WXB1 218 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 CDKL2Q92772 493 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 CNDP1Q96KN2 507 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 MACROD1Q9BQ69 325 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 MESP1Q9BRJ9 268 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 ERP44Q9BS26 406 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 RIC8BQ9NVN3 520 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 MOCS1Q9NZB8 636 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 TXNDC16Q9P2K2 825 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 NOVA2Q9UNW9 492 aaKnown RBP14.48□□□□□ -0.09
CHD3-205ENST00000449744 PSAT1Q9Y617 370 aa14.48□□□□□ -0.09
CHD3-205ENST00000449744 COPG1Q9Y678 874 aaKnown RBP14.48□□□□□ -0.09
CHD3-205ENST00000449744 FANCGO15287 622 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 TP73O15350 636 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 OR1F1O43749 312 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 LCMT2O60294 686 aaKnown RBP14.47□□□□□ -0.09
CHD3-205ENST00000449744 AGFG2O95081 481 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 ILF2Q12905 390 aaKnown RBP14.47□□□□□ -0.09
CHD3-205ENST00000449744 MFAP5Q13361 173 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 CSHL1Q14406 222 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 MINDY4Q4G0A6 757 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 IGFL2Q6UWQ7 119 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 TMEM207Q6UWW9 146 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 CUZD1Q86UP6 607 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 ABHD11Q8NFV4 315 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 OR51Q1Q8NH59 317 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 TM4SF19Q96DZ7 209 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 C19orf60Q96EN9 201 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 LMF1Q96S06 567 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 EGFL8Q99944 293 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 RHOJQ9H4E5 214 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 SAYSD1Q9NPB0 183 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 ASF1BQ9NVP2 202 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 HCN3Q9P1Z3 774 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 WHRNQ9P202 907 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 IKZF3Q9UKT9 509 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 DYRK1BQ9Y463 629 aa14.47□□□□□ -0.09
CHD3-205ENST00000449744 IGHV1-45A0A0A0MS14 117 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 NPEPPSL1A6NEC2 478 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 SGK494L7N484 410 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 EIF3HO15372 352 aaKnown RBP eCLIP14.46□□□□□ -0.095e-6■■■□□ 14.9
CHD3-205ENST00000449744 WFS1O76024 890 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 BMP10O95393 424 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 SERPINA7P05543 415 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 SERPIND1P05546 499 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 PRR35P0CG20 571 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 C8orf89P0DMQ9 161 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 TAS2R39P59534 338 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms