RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 PRSS36Q5K4E3 855 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 GALNT5Q7Z7M9 940 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 TMC8Q8IU68 726 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR4L1Q8NH43 312 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 ASB15Q8WXK1 588 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZYG11BQ9C0D3 744 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 SPNS1Q9H2V7 528 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 CRISPLD1Q9H336 500 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 PRDM5Q9NQX1 630 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 C2orf81A6NN90 581 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 MOCS2O96007 188 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 SERPINF2P08697 491 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 CYP4B1P13584 511 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 RPS3P23396 243 aaKnown RBP eCLIP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR1G1P47890 313 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 TPMTP51580 245 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 CXCR4P61073 352 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 SCN1BQ07699 218 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 SCRN3Q0VDG4 424 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 HYAL2Q12891 473 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 GRM7Q14831 915 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 TEX261Q6UWH6 196 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 MON1AQ86VX9 555 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 RDH10Q8IZV5 341 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 UBE2J2Q8N2K1 259 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR8K3Q8NH51 312 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR5K1Q8NHB7 308 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZNF599Q96NL3 588 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 CHCHD6Q9BRQ6 235 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 PPIL3Q9H2H8 161 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 U3KQ87 197 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 GRK4P32298 578 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 PER3P56645 1201 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 YBEYP58557 167 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 TIGD6Q17RP2 521 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 PTCHD3Q3KNS1 767 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 DPP10Q8N608 796 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 SIPA1Q96FS4 1042 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 AARSD1Q9BTE6 412 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR51E2Q9H255 320 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 TAS2R7Q9NYW3 318 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 SLAMF8Q9P0V8 285 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 IGLV3-10A0A075B6K4 115 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 IGLV3-27P01718 113 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 GRK5P34947 590 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 PWP1Q13610 501 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 SDHAF4Q5VUM1 108 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPSM1Q86YR5 675 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 STK40Q8N2I9 435 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR2T12Q8NG77 320 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR52H1Q8NGJ2 320 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 THUMPD3Q9BV44 507 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPBP1L1Q9HC44 474 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 DYRK4Q9NR20 520 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 CRYL1Q9Y2S2 319 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPR45Q9Y5Y3 372 aa13.04□□□□□ -0.32
SYNGAP1-204ENST00000449372 E9PAM4 449 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZNF37AP17032 561 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 PBX3P40426 434 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 GATMP50440 423 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 MAP2K6P52564 334 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 ERVK-21P61565 698 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 QPRTQ15274 297 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZNF549Q6P9A3 640 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 KDELC1Q6UW63 502 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPAT4Q86UL3 456 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR8K5Q8NH50 307 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 FBXO30Q8TB52 745 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 BRINP2Q9C0B6 783 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 RIBC2Q9H4K1 309 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 FBXO44Q9H4M3 255 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 SEMA4BQ9NPR2 832 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 ELF5Q9UKW6 265 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 HRH3Q9Y5N1 445 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 M0R082 166 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 ARNTLO00327 626 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 MITFO75030 526 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 PTP4A3O75365 173 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 KCNA5P22460 613 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 RGS4P49798 205 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 IL2P60568 153 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 SH3BP2P78314 561 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 PAGE3Q5JUK9 113 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 UMODL1-AS1Q8N2C9 162 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 DTWD1Q8N5C7 304 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 SAV1Q9H4B6 383 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 EMC3Q9P0I2 261 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms