RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 FAM120CQ9NX05 1096 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 TAC3Q9UHF0 121 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CLEC4AQ9UMR7 237 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 USP22Q9UPT9 525 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PEX16Q9Y5Y5 336 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 ARAP2Q8WZ64 1704 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CACNA1CQ13936 2221 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 LY75O60449 1722 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 C7orf72A4D263 438 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SAGE2PA6NJ88 616 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CHURC1-FNTBB4DL54 471 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 H3BNH8 94 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 GTPBP1O00178 669 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 SLC30A4O14863 429 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 OR5F1O95221 314 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PDYNP01213 254 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 HLA-EP13747 358 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 C4BPBP20851 252 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 IGFBP6P24592 240 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 RFC2P35250 354 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 HMGCLP35914 325 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 NKX2-5P52952 324 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 ERVPABLB-1P60509 514 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SPATS1Q496A3 300 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 COLEC12Q5KU26 742 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CXorf57Q6NSI4 855 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 TMPRSS11AQ6ZMR5 421 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CXXC5Q7LFL8 322 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 CMTR2Q8IYT2 770 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 CENPSQ8N2Z9 138 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 OXR1Q8N573 874 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 POMGNT2Q8NAT1 580 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 FCGR1BQ92637 280 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 TFGQ92734 400 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 ARMC5Q96C12 935 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 LMLNQ96KR4 655 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CITED4Q96RK1 184 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SEZ6LQ9BYH1 1024 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 DCSTAMPQ9H295 470 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 TUBA8Q9NY65 449 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 PCTPQ9UKL6 214 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 RABL2BQ9UNT1 228 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PCDHGA4Q9Y5G9 962 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 COLEC10Q9Y6Z7 277 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 A8MV72 311 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 SLC22A1O15245 554 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 EEDO75530 441 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 GRIA2P42262 883 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 NCBP2P52298 156 aaKnown RBP eCLIP6.93□□□□□ -1.3
BEST1-202ENST00000449131 PCDH1Q08174 1060 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PMS2P3Q13401 168 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 TRIM71Q2Q1W2 868 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 ANKDD1AQ495B1 522 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CRB2Q5IJ48 1285 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.93□□□□□ -1.3
BEST1-202ENST00000449131 ZNF648Q5T619 568 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CES4AQ5XG92 561 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 C17orf99Q6UX52 265 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 TMIGD1Q6UXZ0 262 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 HACD2Q6Y1H2 254 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 NUDT13Q86X67 352 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 COMMD2Q86X83 199 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 APCDD1Q8J025 514 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 HDDC3Q8N4P3 179 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PIGXQ8TBF5 258 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 WFIKKN2Q8TEU8 576 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SLC22A17Q8WUG5 538 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 OVCA2Q8WZ82 227 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 MS4A4AQ96JQ5 239 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PRICKLE1Q96MT3 831 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 TRMT61BQ9BVS5 477 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 PCBD2Q9H0N5 130 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CLEC4MQ9H2X3 399 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 TBC1D17Q9HA65 648 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SPATA7Q9P0W8 599 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 MSRAQ9UJ68 235 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ZNF451Q9Y4E5 1061 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PCDHB3Q9Y5E6 796 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PMF1-BGLAPU3KQ54 211 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 IRGMA1A4Y4 181 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 GPR39O43194 453 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 WBP4O75554 376 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 FGF18O76093 207 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 C6orf47O95873 294 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 BCHEP06276 602 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PRKAR1AP10644 381 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CDK4P11802 303 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 OXTRP30559 389 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SLC5A2P31639 672 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ETV3P41162 512 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CCR8P51685 355 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PRMT2P55345 433 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ERVK-21P61565 698 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 GALNT1Q10472 559 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 TMEM115Q12893 351 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 GRIK2Q13002 908 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RAPSNQ13702 412 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 IL18Q14116 193 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SLC9A5Q14940 896 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms