RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 HCN3Q9P1Z3 774 aa26.77■■□□□ 1.88
CBX4-202ENST00000448310 PCDH17O14917 1159 aa26.76■■□□□ 1.87
CBX4-202ENST00000448310 SEC24DO94855 1032 aaPredicted RBP26.76■■□□□ 1.87
CBX4-202ENST00000448310 STSP08842 583 aa26.76■■□□□ 1.87
CBX4-202ENST00000448310 IL1RNP18510 177 aa26.76■■□□□ 1.87
CBX4-202ENST00000448310 TIAL1Q01085 375 aaKnown RBP eCLIP26.76■■□□□ 1.87
CBX4-202ENST00000448310 ZRSR2Q15696 482 aaKnown RBP26.76■■□□□ 1.87
CBX4-202ENST00000448310 MINDY4Q4G0A6 757 aa26.76■■□□□ 1.87
CBX4-202ENST00000448310 C1QL3Q5VWW1 255 aa26.76■■□□□ 1.87
CBX4-202ENST00000448310 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.76■■□□□ 1.87
CBX4-202ENST00000448310 FAM167BQ9BTA0 163 aa26.76■■□□□ 1.87
CBX4-202ENST00000448310 TRMT6Q9UJA5 497 aaKnown RBP26.76■■□□□ 1.87
CBX4-202ENST00000448310 PDE10AQ9Y233 779 aa26.76■■□□□ 1.87
CBX4-202ENST00000448310 FEZF1A0PJY2 475 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 OR2W5A6NFC9 320 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 H0YIG0 161 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 NSA2O95478 260 aaKnown RBP26.75■■□□□ 1.87
CBX4-202ENST00000448310 RPS15AP62244 130 aaKnown RBP26.75■■□□□ 1.87
CBX4-202ENST00000448310 CSNK1G2P78368 415 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 ZCCHC10Q8TBK6 192 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 EEF1AKMT1Q8WVE0 214 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 METTL21AQ8WXB1 218 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 NR4A3Q92570 626 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 ALKBH8Q96BT7 664 aaKnown RBP26.75■■□□□ 1.87
CBX4-202ENST00000448310 TUBB6Q9BUF5 446 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 ATG10Q9H0Y0 220 aa26.75■■□□□ 1.87
CBX4-202ENST00000448310 ZNF33BQ06732 778 aa26.74■■□□□ 1.87
CBX4-202ENST00000448310 ABHD17BQ5VST6 288 aa26.74■■□□□ 1.87
CBX4-202ENST00000448310 OR51Q1Q8NH59 317 aa26.74■■□□□ 1.87
CBX4-202ENST00000448310 MCOLN3Q8TDD5 553 aa26.74■■□□□ 1.87
CBX4-202ENST00000448310 JRKLQ9Y4A0 524 aa26.74■■□□□ 1.87
CBX4-202ENST00000448310 LRBAP50851 2863 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 KCNE1BA0A087WTH5 132 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 SGK494L7N484 410 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 EIF3FO00303 357 aaPredicted RBP26.73■■□□□ 1.87
CBX4-202ENST00000448310 BANF1O75531 89 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 ICAM2P13598 275 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 HRH2P25021 359 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 BCL6P41182 706 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 XCR1P46094 333 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 INAQ16352 499 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 TMEM214Q6NUQ4 689 aaKnown RBP26.73■■□□□ 1.87
CBX4-202ENST00000448310 AGTRAPQ6RW13 159 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 CPEB2Q7Z5Q1 589 aaKnown RBP26.73■■□□□ 1.87
CBX4-202ENST00000448310 PPIL6Q8IXY8 311 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 KCT2Q8NC54 265 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 CCDC138Q96M89 665 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 CYTH2Q99418 400 aa26.73■■□□□ 1.87
CBX4-202ENST00000448310 A0A1B0GUH1 482 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 A8MUI8 341 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 PGRMC1O00264 195 aaKnown RBP26.72■■□□□ 1.87
CBX4-202ENST00000448310 NAE1Q13564 534 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 PTK6Q13882 451 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 CRYMQ14894 314 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 RBM20Q5T481 1227 aaKnown RBP26.72■■□□□ 1.87
CBX4-202ENST00000448310 PAQR3Q6TCH7 311 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 GFRALQ6UXV0 394 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 C17orf64Q86WR6 236 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 C2CD4AQ8NCU7 369 aaPredicted RBP26.72■■□□□ 1.87
CBX4-202ENST00000448310 RNF32Q9H0A6 362 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 STMN3Q9NZ72 180 aa26.72■■□□□ 1.87
CBX4-202ENST00000448310 OR5H15A6NDH6 313 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 LCMT2O60294 686 aaKnown RBP26.71■■□□□ 1.87
CBX4-202ENST00000448310 C8GP07360 202 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 CDH1P12830 882 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 PGAM1P18669 254 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 MST1P26927 711 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 GABRB3P28472 473 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 RGS4P49798 205 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 AP2B1P63010 937 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 PHKG1Q16816 387 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 BTBD16Q32M84 506 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 RNASEH2BQ5TBB1 312 aaKnown RBP26.71■■□□□ 1.87
CBX4-202ENST00000448310 FCRLBQ6BAA4 426 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 LRRC8EQ6NSJ5 796 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 UGT3A1Q6NUS8 523 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 ASPGQ86U10 573 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 SLC26A11Q86WA9 606 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 PDSS2Q86YH6 399 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 CAMKVQ8NCB2 501 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 TM4SF19Q96DZ7 209 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 NAP1L3Q99457 506 aaPredicted RBP26.71■■□□□ 1.87
CBX4-202ENST00000448310 RBCK1Q9BYM8 510 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 PCBD2Q9H0N5 130 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 PARVBQ9HBI1 364 aa26.71■■□□□ 1.87
CBX4-202ENST00000448310 PRAMEF2O60811 474 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 RDH16O75452 317 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 RASAL1O95294 804 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 ST13P50502 369 aaKnown RBP26.7■■□□□ 1.86
CBX4-202ENST00000448310 CDKN2DP55273 166 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 PMP22Q01453 160 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 ANKRD37Q7Z713 158 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 PALM2Q8IXS6 379 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 MYO1HQ8N1T3 1032 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 SUN3Q8TAQ9 357 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 THAP11Q96EK4 314 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 LINGO1Q96FE5 620 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 ANKHQ9HCJ1 492 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 TAS2R13Q9NYV9 303 aa26.7■■□□□ 1.86
CBX4-202ENST00000448310 SLC17A6Q9P2U8 582 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms