RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 CYTH2Q99418 400 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 NPAS2Q99743 824 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 BAG1Q99933 345 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-203ENST00000447360 ZFYVE21Q9BQ24 234 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 GPATCH1Q9BRR8 931 aaKnown RBP6.68□□□□□ -1.34
LRRC28-203ENST00000447360 SARGQ9BW04 601 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 RAB11FIP5Q9BXF6 653 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 VN1R1Q9GZP7 353 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 C10orf88Q9H8K7 445 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 KCNK13Q9HB14 408 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 MMP25Q9NPA2 562 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 SMARCAL1Q9NZC9 954 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 LRFN1Q9P244 771 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 STOX2Q9P2F5 926 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-203ENST00000447360 IMPACTQ9P2X3 320 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 RSPH14Q9UHP6 348 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 SLC39A10Q9ULF5 831 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 AAR2Q9Y312 384 aaKnown RBP6.68□□□□□ -1.34
LRRC28-203ENST00000447360 GTF3C1Q12789 2109 aa6.68□□□□□ -1.34
LRRC28-203ENST00000447360 CPAMD8Q8IZJ3 1885 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 OR2A25A4D2G3 310 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 GRID2IPA4D2P6 1211 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 F8W8V4 182 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 H0YGG7 62 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 FFAR3O14843 346 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 TFECO14948 347 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-203ENST00000447360 GPR42O15529 346 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 VPS26AO75436 327 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 C8BP07358 591 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 OR56A5P0C7T3 313 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 TFEBP19484 476 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 CTNNA2P26232 953 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 RBL1P28749 1068 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 KIR2DL3P43628 341 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 AGTR2P50052 363 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 EFNA3P52797 238 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 DLX5P56178 289 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 COPS2P61201 443 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 ARF3P61204 181 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-203ENST00000447360 KEAP1Q14145 624 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 FAM53BQ14153 422 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 DBN1Q16643 649 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 ODF2Q5BJF6 829 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 FBXO42Q6P3S6 717 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 TTC23LQ6PF05 361 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 UNC5DQ6UXZ4 953 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 THSD4Q6ZMP0 1018 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 BBS12Q6ZW61 710 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 TAX1BP1Q86VP1 789 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 PAQR7Q86WK9 346 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 SPC24Q8NBT2 197 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 OR2L3Q8NG85 312 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 C16orf52Q8NHV5 167 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 HMGCLL1Q8TB92 370 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 ASZ1Q8WWH4 475 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 ALG3Q92685 438 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 P3H4Q92791 437 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 HAUS1Q96CS2 278 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 IL17FQ96PD4 163 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 DESI2Q9BSY9 194 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 SLC6A16Q9GZN6 736 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 DRC3Q9H069 523 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 GBA3Q9H227 469 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 TRIM45Q9H8W5 580 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-203ENST00000447360 ARNT2Q9HBZ2 717 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 NEUROD4Q9HD90 331 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 FEZ2Q9UHY8 353 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-203ENST00000447360 EFR3BQ9Y2G0 817 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.67□□□□□ -1.34
LRRC28-203ENST00000447360 PRSS21Q9Y6M0 314 aa6.67□□□□□ -1.34
LRRC28-203ENST00000447360 IGHV3-20A0A0C4DH32 117 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 A6NNC1 897 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 HACD1B0YJ81 288 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 H0YIG0 161 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 APOC4-APOC2K7ER74 178 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 CCL22O00626 93 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 TXNDC9O14530 226 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 FOXS1O43638 330 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 MAN1A2O60476 641 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 CDC40O60508 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
LRRC28-203ENST00000447360 GPC4O75487 556 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 ATE1O95260 518 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 LY6G6DO95868 133 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 APOC2P02655 101 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 PRSS56P0CW18 603 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 PTPN7P35236 360 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 ZFP36L2P47974 494 aaKnown RBP6.66□□□□□ -1.34
LRRC28-203ENST00000447360 CYB561P49447 251 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 NAP1L1P55209 391 aaKnown RBP6.66□□□□□ -1.34
LRRC28-203ENST00000447360 RWDD2BP57060 319 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 NUP107P57740 925 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 TAS2R50P59544 299 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 HSPA14Q0VDF9 509 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 PTK6Q13882 451 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 SLC25A35Q3KQZ1 300 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 CMPK2Q5EBM0 449 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 EMC4Q5J8M3 183 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 SHEQ5VZ18 495 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 ITPRIPL1Q6GPH6 555 aa6.66□□□□□ -1.34
LRRC28-203ENST00000447360 DENND5AQ6IQ26 1287 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms