RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 SOX8P57073 446 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 POU4F1Q01851 419 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 MYBPC3Q14896 1274 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 SLMAPQ14BN4 828 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 EFTUD2Q15029 972 aaKnown RBP eCLIP13.34□□□□□ -0.27
TREX1-202ENST00000444177 PPP1R3AQ16821 1122 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 MUM1Q2TAK8 710 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 PLEKHN1Q494U1 663 aaPredicted RBP13.34□□□□□ -0.27
TREX1-202ENST00000444177 PRR30Q53SZ7 412 aaPredicted RBP13.34□□□□□ -0.27
TREX1-202ENST00000444177 LCTLQ6UWM7 567 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 SBSNQ6UWP8 590 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 COX15Q7KZN9 410 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 C17orf64Q86WR6 236 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 ANKRD49Q8WVL7 239 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 ATL1Q8WXF7 558 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.34□□□□□ -0.27
TREX1-202ENST00000444177 FKBP10Q96AY3 582 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 NACC2Q96BF6 587 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 FBXL8Q96CD0 374 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 C10orf90Q96M02 699 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 PSMG3-AS1Q96PY0 264 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 OR2A5Q96R48 311 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 GPR22Q99680 433 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 HAUS8Q9BT25 410 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 SGPP1Q9BX95 441 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 UNKQ9C0B0 810 aaKnown RBP13.34□□□□□ -0.27
TREX1-202ENST00000444177 ZNF552Q9H707 407 aaPredicted RBP13.34□□□□□ -0.27
TREX1-202ENST00000444177 WDR54Q9H977 334 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 CTNNAL1Q9UBT7 734 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 PCM1Q15154 2024 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 MDC1Q14676 2089 aaKnown RBP13.33□□□□□ -0.27
TREX1-202ENST00000444177 AGPSO00116 658 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 P2RX6O15547 441 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 KLHL41O60662 606 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 FAM155BO75949 473 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 C1QAP02745 245 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 STATHP02808 62 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 ALPPP05187 535 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 RHOXF2BP0C7M4 288 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 CDH1P12830 882 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 STMN1P16949 149 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 FBLP22087 321 aaKnown RBP13.33□□□□□ -0.28
TREX1-202ENST00000444177 MMP11P24347 488 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 HRH2P25021 359 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 TNFRSF8P28908 595 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 SPRP35270 261 aaPredicted RBP13.33□□□□□ -0.28
TREX1-202ENST00000444177 RPS15AP62244 130 aaKnown RBP13.33□□□□□ -0.28
TREX1-202ENST00000444177 TSNQ15631 228 aaKnown RBP13.33□□□□□ -0.28
TREX1-202ENST00000444177 NKG7Q16617 165 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 PRTGQ2VWP7 1150 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 TEX35Q5T0J7 233 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 PRMT9Q6P2P2 845 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 IGFL3Q6UXB1 125 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 LRRN4CLQ8ND94 238 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 OR56A3Q8NH54 315 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 SPSB2Q99619 263 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 EGFL8Q99944 293 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 RHOXF2Q9BQY4 288 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 SLC26A1Q9H2B4 701 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 SOX17Q9H6I2 414 aaPredicted RBP13.33□□□□□ -0.28
TREX1-202ENST00000444177 ZNF304Q9HCX3 659 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 TMEM184CQ9NVA4 438 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 CTSFQ9UBX1 484 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 NOVA2Q9UNW9 492 aaKnown RBP13.33□□□□□ -0.28
TREX1-202ENST00000444177 OARD1Q9Y530 152 aa13.33□□□□□ -0.28
TREX1-202ENST00000444177 TCP11X1B4DZS4 312 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 TXNDC9O14530 226 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 ANXA5P08758 320 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 GP1BBP13224 206 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 VARSP26640 1264 aaKnown RBP13.32□□□□□ -0.28
TREX1-202ENST00000444177 GRK3P35626 688 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 CSNK1G2P78368 415 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 RELAQ04206 551 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 NAB1Q13506 487 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 GRTP1Q5TC63 336 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 FHL5Q5TD97 284 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 SHISA6Q6ZSJ9 500 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 RAPH1Q70E73 1250 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 SPATA6LQ8N4H0 392 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 ANKRD7Q92527 254 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 MRRFQ96E11 262 aaKnown RBP13.32□□□□□ -0.28
TREX1-202ENST00000444177 C19orf60Q96EN9 201 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 TSNARE1Q96NA8 513 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 NINJ2Q9NZG7 142 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 FBXL4Q9UKA2 621 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 NXT1Q9UKK6 140 aaKnown RBP13.32□□□□□ -0.28
TREX1-202ENST00000444177 B3GNT3Q9Y2A9 372 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 DYRK1BQ9Y463 629 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 DOCK10Q96BY6 2186 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 POLEQ07864 2286 aa13.32□□□□□ -0.28
TREX1-202ENST00000444177 FEZF1A0PJY2 475 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 BLACEA4D250 179 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 NCF1BA6NI72 391 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 VSTM2BA6NLU5 285 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 NCF1CA8MVU1 366 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 SOCS6O14544 535 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 PRPF4O43172 522 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms