RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ZNF662Q6ZS27 426 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 ANKRD37Q7Z713 158 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 PAQR7Q86WK9 346 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 RNF10Q8N5U6 811 aaKnown RBP9.41□□□□□ -0.9
SYN3-204ENST00000441821 OR13J1Q8NGT2 312 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 GSDMBQ8TAX9 411 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 ACTL9Q8TC94 416 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 MAGEC3Q8TD91 643 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 RERGQ96A58 199 aaPredicted RBP9.41□□□□□ -0.9
SYN3-204ENST00000441821 CHP1Q99653 195 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 LIME1Q9H400 295 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 ZNF358Q9NW07 568 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 TRMT1Q9NXH9 659 aaKnown RBP9.41□□□□□ -0.9
SYN3-204ENST00000441821 SPATA7Q9P0W8 599 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 PCDHA13Q9Y5I0 950 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 NFS1Q9Y697 457 aa9.41□□□□□ -0.9
SYN3-204ENST00000441821 IGKV1-8A0A0C4DH67 115 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 FAM237BA0A1B0GVD1 139 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 KRT87PA6NCN2 255 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 USP27XA6NNY8 438 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 PROM1O43490 865 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 EZRP15311 586 aaKnown RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 DNASE1P24855 282 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 PPARGP37231 505 aaPredicted RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 BDKRB1P46663 353 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 TAS2R50P59544 299 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 EIF3EP60228 445 aaKnown RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 COPS2P61201 443 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 NDUFA9Q16795 377 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 PARP6Q2NL67 630 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 MFSD4BQ5TF39 518 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 ZNF468Q5VIY5 522 aaPredicted RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 ZNF425Q6IV72 752 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 AFTPHQ6ULP2 937 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 RAD9BQ6WBX8 426 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 ACAD11Q709F0 780 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 TAOK1Q7L7X3 1001 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 PCGF5Q86SE9 256 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 ZNF227Q86WZ6 799 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 TMEM139Q8IV31 216 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 CCDC71Q8IV32 467 aaPredicted RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 SYCE1Q8N0S2 351 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 MYRIPQ8NFW9 859 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 TRIM58Q8NG06 486 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 OR4L1Q8NH43 312 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 KIF18AQ8NI77 898 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 ACAT2Q9BWD1 397 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 POLDIP3Q9BY77 421 aaKnown RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 CDCP1Q9H5V8 836 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 TRIM45Q9H8W5 580 aaPredicted RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 MRPS30Q9NP92 439 aaKnown RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 SPTLC3Q9NUV7 552 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 PIH1D1Q9NWS0 290 aaKnown RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 UTP6Q9NYH9 597 aaKnown RBP9.4□□□□□ -0.9
SYN3-204ENST00000441821 PYCARDQ9ULZ3 195 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 EFR3BQ9Y2G0 817 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.4□□□□□ -0.9
SYN3-204ENST00000441821 L3MBTL1Q9Y468 752 aa9.4□□□□□ -0.9
SYN3-204ENST00000441821 FBN1P35555 2871 aaKnown RBP9.4□□□□□ -0.91
SYN3-204ENST00000441821 OR2W5A6NFC9 320 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 NDC80O14777 642 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 TFECO14948 347 aaPredicted RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 KPNA5O15131 536 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 PRMT3O60678 531 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 ZNF189O75820 626 aaPredicted RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 NSA2O95478 260 aaKnown RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 METTL18O95568 372 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 GOT2P00505 430 aaKnown RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 ERGP11308 486 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 TFEBP19484 476 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 CTNNA2P26232 953 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 MARCKSL1P49006 195 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 CYB561P49447 251 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 PRDX1Q06830 199 aaKnown RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 ACTN3Q08043 901 aaPredicted RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 PMPCAQ10713 525 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 SEMA3AQ14563 771 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 CCDC38Q502W7 563 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 PAPD4Q6PIY7 484 aaKnown RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 ZNF534Q76KX8 674 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 CAMKMTQ7Z624 323 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 RPS19BP1Q86WX3 136 aaKnown RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 KRT222Q8N1A0 295 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 RPRMLQ8N4K4 120 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 OR9A4Q8NGU2 314 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 OR51Q1Q8NH59 317 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 C16orf52Q8NHV5 167 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 MCOLN3Q8TDD5 553 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 SKA2Q8WVK7 121 aaPredicted RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 SMPDL3AQ92484 453 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 TMEM125Q96AQ2 219 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 RMND5BQ96G75 393 aaPredicted RBP9.39□□□□□ -0.91
SYN3-204ENST00000441821 SEC16BQ96JE7 1060 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 FOPNLQ96NB1 174 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 PANX3Q96QZ0 392 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 LPAR4Q99677 370 aa9.39□□□□□ -0.91
SYN3-204ENST00000441821 DESI2Q9BSY9 194 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms