RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 RPS3P23396 243 aaKnown RBP eCLIP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 CCND3P30281 292 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ACSL1P33121 698 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 IGFALSP35858 605 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 GRK6P43250 576 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ST3GAL3Q11203 375 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 CGB2Q6NT52 195 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 KLHL24Q6TFL4 600 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 RANBP10Q6VN20 620 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 SLITRK4Q8IW52 837 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 NPWQ8N729 165 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 AVL9Q8NBF6 648 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 RIPOR3Q96MK2 946 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ALPK1Q96QP1 1244 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 MYOCQ99972 504 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ZDHHC7Q9NXF8 308 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 IKZF2Q9UKS7 526 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 MBLAC1A4D2B0 266 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ENTPD6O75354 484 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 T-ENOLP0DO92 83 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 CHRM1P11229 460 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ACVR2AP27037 513 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ITPKBP27987 946 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 CD68P34810 354 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 HSF2Q03933 536 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 REEP3Q6NUK4 255 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 NOXRED1Q6NXP6 359 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 NCEH1Q6PIU2 408 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 LYARQ9NX58 379 aaKnown RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 EXOSC1Q9Y3B2 195 aaKnown RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 LEFTY2O00292 366 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 RCBTB2O95199 551 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 BCHEP06276 602 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 GDF5P43026 501 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 STARP49675 285 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 RHAGQ02094 409 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ZNF45Q02386 682 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 RAB39AQ14964 217 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 COLEC12Q5KU26 742 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 TMIGD1Q6UXZ0 262 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 Q6ZVU0 165 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 CAMKVQ8NCB2 501 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 BBS10Q8TAM1 723 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ING5Q8WYH8 240 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 MYRFLQ96LU7 910 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 EXO5Q9H790 373 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 TBC1D17Q9HA65 648 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 PCDHB11Q9Y5F2 797 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 EDIL3O43854 480 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 MRPS14O60783 128 aaKnown RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 COQ9O75208 318 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 JUPP14923 745 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 ZNF3P17036 446 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 GGT1P19440 569 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 BLKP51451 505 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 RPS13P62277 151 aaKnown RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 LRRC32Q14392 662 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 GK3PQ14409 553 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 ARFGAP1Q8N6T3 406 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 CDADC1Q9BWV3 514 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 INSL6Q9Y581 213 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 TOR1BO14657 336 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 ZNF865P0CJ78 1059 aaPredicted RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 GCAP28676 217 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 GBX2P52951 348 aaPredicted RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 INHBCP55103 352 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 VBP1P61758 197 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 AQP11Q8NBQ7 271 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 OR10H4Q8NGA5 316 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 IGSF21Q96ID5 467 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 KCNK13Q9HB14 408 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 GPRC5BQ9NZH0 403 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 M0QX08 132 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 SAP18O00422 153 aaKnown RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 POP7O75817 140 aaKnown RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 GALTP07902 379 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 ATP5A1P25705 553 aaKnown RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 HNF1BP35680 557 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 TXNL4AP83876 142 aaKnown RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 CEACAM20Q6UY09 585 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 SLC36A4Q6YBV0 504 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 PARGQ86W56 976 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 CNTN4Q8IWV2 1026 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 SUOXP51687 545 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 PCBP2Q15366 365 aaKnown RBP eCLIP12.49□□□□□ -0.413e-10■■■□□ 16.7
BRPF3-203ENST00000441123 VMACQ2NL98 169 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 FRRS1Q6ZNA5 592 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 OTOP2Q7RTS6 562 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 SCLYQ96I15 445 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 PTPN18Q99952 460 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 BHLHE41Q9C0J9 482 aaPredicted RBP12.49□□□□□ -0.41
BRPF3-203ENST00000441123 B4GALT6Q9UBX8 382 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 UTS2RQ9UKP6 389 aa12.49□□□□□ -0.41
BRPF3-203ENST00000441123 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms