RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	EPHA8	P29322	1005 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ECHS1	P30084	290 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CA5A	P35218	305 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	GP5	P40197	560 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SLC1A2	P43004	574 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	MSH2	P43246	934 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	PRLHR	P49683	370 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	HNMT	P50135	292 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CTSC	P53634	463 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	INHBC	P55103	352 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	GPX6	P59796	221 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ARHGAP8	P85298	464 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CBX3	Q13185	183 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SLC14A1	Q13336	389 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	NAB1	Q13506	487 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CUL3	Q13618	768 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	BOP1	Q14137	746 aa	Known RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	GALE	Q14376	348 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	KRT33B	Q14525	404 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	UAP1	Q16222	522 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TTLL9	Q3SXZ7	439 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	FAM153C	Q494X1	144 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	KHDC1	Q4VXA5	237 aa	Known RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	IGSF11	Q5DX21	431 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	BEND6	Q5SZJ8	279 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	GRTP1	Q5TC63	336 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	LGSN	Q5TDP6	509 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	FAM45BP	Q6NSW5	357 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	EMB	Q6PCB8	327 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	C6orf89	Q6UWU4	347 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CYS1	Q717R9	158 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	STRA8	Q7Z7C7	330 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	APLF	Q8IW19	511 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	UNC5B	Q8IZJ1	945 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CLDN19	Q8N6F1	224 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ANKS4B	Q8N8V4	417 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	FBXO15	Q8NCQ5	510 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ZNF548	Q8NEK5	533 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	FAM46D	Q8NEK8	389 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	OR56B2P	Q8NGI1	322 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	OR2I1P	Q8NGU4	316 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	FAM45A	Q8TCE6	357 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	HM13	Q8TCT9	377 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SETD7	Q8WTS6	366 aa	Known RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ELMO1	Q92556	727 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TMEM159	Q96B96	161 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SGCZ	Q96LD1	299 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CYTH2	Q99418	400 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CPNE1	Q99829	537 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	WDR83	Q9BRX9	315 aa	Known RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TIMM29	Q9BSF4	260 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	LRRC61	Q9BV99	259 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ACPT	Q9BZG2	426 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TMEM168	Q9H0V1	697 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TRIT1	Q9H3H1	467 aa	Known RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TCEAL2	Q9H3H9	227 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	DPEP2	Q9H4A9	486 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	STN1	Q9H668	368 aa	Known RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	IL21R	Q9HBE5	538 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	PARVB	Q9HBI1	364 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SARS2	Q9NP81	518 aa	Known RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	PARD6A	Q9NPB6	346 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	KLC4	Q9NSK0	619 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	GPATCH2	Q9NW75	528 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	NMRK1	Q9NWW6	199 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CORO1C	Q9ULV4	474 aa	Predicted RBP	6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	PPT2	Q9UMR5	302 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	MAPRE3	Q9UPY8	281 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	KCNK6	Q9Y257	313 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CBY1	Q9Y3M2	126 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	PCDHGB2	Q9Y5G2	931 aa		6	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TNRC6B	Q9UPQ9	1833 aa	Known RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	MYLK	Q15746	1914 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SPAG17	Q6Q759	2223 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	IGLV3-16	A0A075B6K0	115 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	EXOC1L	A0A1B0GW35	172 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ACOD1	A6NK06	481 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	FAM159B	A6NKW6	160 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	OR5K4	A6NMS3	321 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	C4orf47	A7E2U8	309 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638		K7EPI3	171 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	TPP1	O14773	563 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	LIN7A	O14910	233 aa	Predicted RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	YY2	O15391	372 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SEC24D	O94855	1032 aa	Predicted RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	HAUS5	O94927	633 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ABHD2	P08910	425 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SLC35G4	P0C7Q5	338 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SAT1	P21673	171 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	IL32	P24001	234 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	AK4	P27144	223 aa	Predicted RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SPR	P35270	261 aa	Predicted RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CBX5	P45973	191 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	LEPR	P48357	1165 aa	Known RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	SERPINB9	P50453	376 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	DUSP3	P51452	185 aa	Predicted RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	CLCNKA	P51800	687 aa		5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	ADAR	P55265	1226 aa	Known RBP	5.99	□□□□□ -1.45
ECHDC1-208	ENST00000436638	B4GALNT1	Q00973	533 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms