RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RAB21Q9UL25 225 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 COMMD3-BMI1R4GMX3 469 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TGFB1P01137 390 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 CD3GP09693 182 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 POU2F1P14859 743 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 LHCGRP22888 699 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 NRLP54845 237 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 CDH15P55291 814 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 OR2B6P58173 313 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 S100A12P80511 92 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 SEMA3AQ14563 771 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 ABHD17BQ5VST6 288 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TATDN1Q6P1N9 297 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 C15orf52Q6ZUT6 534 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 GPR137CQ8N3F9 429 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 OSTF1Q92882 214 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 SNX27Q96L92 541 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 RIOK2Q9BVS4 552 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TLR10Q9BXR5 811 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 POLR2J2Q9GZM3 115 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FBRSL1Q9HCM7 1045 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 POLE4Q9NR33 117 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PRTFDC1Q9NRG1 225 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PCDHB14Q9Y5E9 798 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 DIRAS3O95661 229 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 CD63P08962 238 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 ATP1B2P14415 290 aaPredicted RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TYRP1P17643 537 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 S1PR1P21453 382 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 GSTT1P30711 240 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 UGT2B10P36537 528 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 E2F1Q01094 437 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FAM174BQ3ZCQ3 159 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 RBM44Q6ZP01 1051 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 P2RY8Q86VZ1 359 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 CIR1Q86X95 450 aaPredicted RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 DCP2Q8IU60 420 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 RCBTB1Q8NDN9 531 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PDZD7Q9H5P4 517 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TMLHEQ9NVH6 421 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FBXW11Q9UKB1 542 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 H7C417 338 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 ALOX15BO15296 676 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PABPC4LP0CB38 370 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 MPSTP25325 297 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 EMC10Q5UCC4 262 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 RAET1LQ5VY80 246 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 KDELC1Q6UW63 502 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PLXDC1Q8IUK5 500 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 ART4Q93070 314 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 MAP3K3Q99759 626 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 C8orf33Q9H7E9 229 aaPredicted RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TM9SF3Q9HD45 589 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PNPOQ9NVS9 261 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PLLPQ9Y342 182 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PCDHGA10Q9Y5H3 936 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 DCCP43146 1447 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 hCG_2039718K7EN88 272 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 IFNA5P01569 189 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 GSTM4Q03013 218 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 PMS2P3Q13401 168 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 VMACQ2NL98 169 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 PRRT3Q5FWE3 981 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 ABHD12BQ7Z5M8 362 aaPredicted RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 XYLT1Q86Y38 959 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 PGAM4Q8N0Y7 254 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 HTRA1Q92743 480 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 ARMC5Q96C12 935 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 P2RY13Q9BPV8 354 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 MYNNQ9NPC7 610 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 TMED5Q9Y3A6 229 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 OR4F21O95013 312 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 IFNA1P01562 189 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 H1F0P07305 194 aaKnown RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 KIAA1161Q6NSJ0 714 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 ADGRA1Q86SQ6 560 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 WDSUB1Q8N9V3 476 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 GRPEL2Q8TAA5 225 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 COPS4Q9BT78 406 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 OR8D2Q9GZM6 311 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 IRF2BPLQ9H1B7 796 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SFXN1Q9H9B4 322 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 NOP16Q9Y3C1 178 aaKnown RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 GALTP07902 379 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SMPD1P17405 629 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 HRH2P25021 359 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 DNASE1L3Q13609 305 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 BCL2A1Q16548 175 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 AADACL4Q5VUY2 407 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 REP15Q6BDI9 236 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 YTHDF3Q7Z739 585 aaKnown RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 OR8S1Q8NH09 359 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 YIPF4Q9BSR8 244 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 TCRBV21S2A2A0A5A6 115 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 INMTO95050 263 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 DLX2Q07687 328 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms