RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CDHR3Q6ZTQ4 885 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 SLC24A5Q71RS6 500 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 SLC47A2Q86VL8 602 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 IQCHQ86VS3 1027 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 NBPF5PQ86XG9 351 aaPredicted RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 ABHD12Q8N2K0 398 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 OR4D10Q8NGI6 311 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 NPRL2Q8WTW4 380 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 PROX1Q92786 737 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CDHR1Q96JP9 859 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 SLC2A11Q9BYW1 496 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 GPR88Q9GZN0 384 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 PRR34Q9NV39 138 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 TBC1D7Q9P0N9 293 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 TXNDC16Q9P2K2 825 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 MORF4L1Q9UBU8 362 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 PRDM4Q9UKN5 801 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 ELF5Q9UKW6 265 aaPredicted RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 TMCC3Q9ULS5 477 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 ZNF510Q9Y2H8 683 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 FAM169AQ9Y6X4 670 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 SYNRGQ9UMZ2 1314 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 TRBC2A0A5B9 178 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 TRIM64CA6NLI5 447 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 C2CD4DB7Z1M9 353 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 ZNF646O15015 1829 aaPredicted RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 SURF4O15260 269 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 POP4O95707 220 aaKnown RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 DNTTP04053 509 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 AKR1B1P15121 316 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 AADACP22760 399 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 KRT20P35900 424 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 BPIFB3P59826 476 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 DCDC1P59894 354 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 POLR2LP62875 67 aaKnown RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 FCHO2Q0JRZ9 810 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 RALGDSQ12967 914 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 ZNF177Q13360 481 aaPredicted RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 ALCAMQ13740 583 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 MS4A18Q3C1V0 323 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 GPR139Q6DWJ6 353 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 FAM131BQ86XD5 332 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 POGLUT1Q8NBL1 392 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 SLC4A11Q8NBS3 891 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 TSACCQ96A04 125 aaPredicted RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 TRIM44Q96DX7 344 aaPredicted RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 OTUB1Q96FW1 271 aaPredicted RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 PDLIM5Q96HC4 596 aaKnown RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 FAM218AQ96MZ4 157 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 MUS81Q96NY9 551 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 PASKQ96RG2 1323 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 NFKBIL1Q9UBC1 381 aaPredicted RBP2.72□□□□□ -1.97
CLK1-204ENST00000432425 CTSZQ9UBR2 303 aa2.72□□□□□ -1.97
CLK1-204ENST00000432425 TRAV24A0A0B4J272 114 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 A0A1W2PPK0 400 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 SLC1A7O00341 560 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 NR2F1P10589 423 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 LIMK2P53671 638 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 NONOQ15233 471 aaKnown RBP eCLIP2.71□□□□□ -1.98
CLK1-204ENST00000432425 HSP90AB3PQ58FF7 597 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 C9orf152Q5JTZ5 239 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 BRINP3Q76B58 766 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 GPC2Q8N158 579 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 FBXL16Q8N461 479 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 OR10G7Q8NGN6 311 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 CHURC1Q8WUH1 139 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 TOMM40LQ969M1 308 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 PSMB7Q99436 277 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 CDCA3Q99618 268 aaPredicted RBP2.71□□□□□ -1.98
CLK1-204ENST00000432425 TUBB1Q9H4B7 451 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 HEXA-AS1Q9H8Q6 139 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 NKIRAS2Q9NYR9 191 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 ODF2LQ9ULJ1 636 aa2.71□□□□□ -1.98
CLK1-204ENST00000432425 IGLV3-10A0A075B6K4 115 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 IGHV4-30-2A0A087WSY4 118 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 K7EQD1 137 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 P4HA2O15460 535 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 BCL2L11O43521 198 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 ADRB2P07550 413 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 HSP90AB1P08238 724 aaKnown RBP2.7□□□□□ -1.98
CLK1-204ENST00000432425 MYL6BP14649 208 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 CYP11B2P19099 503 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 AZGP1P25311 298 aaKnown RBP2.7□□□□□ -1.98
CLK1-204ENST00000432425 CAPZA2P47755 286 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 KRT83P78385 493 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 ZFP36L1Q07352 338 aaKnown RBP2.7□□□□□ -1.98
CLK1-204ENST00000432425 RASGEF1BQ0VAM2 473 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 SRSF9Q13242 221 aaKnown RBP eCLIP2.7□□□□□ -1.98
CLK1-204ENST00000432425 FGD3Q5JSP0 725 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 ARMC4Q5T2S8 1044 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 ZNF841Q6ZN19 808 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 Q6ZR54 194 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 SLC25A42Q86VD7 318 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 HPS6Q86YV9 775 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 RCOR2Q8IZ40 523 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 MAML2Q8IZL2 1156 aaPredicted RBP2.7□□□□□ -1.98
CLK1-204ENST00000432425 NAT8LQ8N9F0 302 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 ROBO4Q8WZ75 1007 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms