RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ELOVL7A1L3X0 281 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 VGLL3A8MV65 326 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 FAM220BPB1ANY3 271 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 CACNB4O00305 520 aaPredicted RBP18.81■□□□□ 0.6
VRK2-205ENST00000432057 YY2O15391 372 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 C1QCP02747 245 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 PIM1P11309 404 aaPredicted RBP18.81■□□□□ 0.6
VRK2-205ENST00000432057 EFNA1P20827 205 aaPredicted RBP18.81■□□□□ 0.6
VRK2-205ENST00000432057 IGFBP4P22692 258 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 MRPS21P82921 87 aaKnown RBP18.81■□□□□ 0.6
VRK2-205ENST00000432057 SLC14A1Q13336 389 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 PDK3Q15120 406 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 C6orf52Q5T4I8 152 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 TMEM92Q6UXU6 159 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 COMMD6Q7Z4G1 85 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 FAM129CQ86XR2 697 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 EPHX4Q8IUS5 362 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 MICU2Q8IYU8 434 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 CLECL1Q8IZS7 167 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 OR8J2Q8NGG1 315 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 SH3KBP1Q96B97 665 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 FAM120BQ96EK7 910 aaKnown RBP18.81■□□□□ 0.6
VRK2-205ENST00000432057 MRGPRX1Q96LB2 322 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 RMI1Q9H9A7 625 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 KCNK12Q9HB15 430 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 IMP3Q9NV31 184 aaKnown RBP18.81■□□□□ 0.6
VRK2-205ENST00000432057 FAM120CQ9NX05 1096 aaKnown RBP18.81■□□□□ 0.6
VRK2-205ENST00000432057 DLGAP2Q9P1A6 1054 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 NCKAP1Q9Y2A7 1128 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 AP3M1Q9Y2T2 418 aa18.81■□□□□ 0.6
VRK2-205ENST00000432057 A0A1W2PPV9 198 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 SOCS2O14508 198 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 DENRO43583 198 aaKnown RBP18.8■□□□□ 0.6
VRK2-205ENST00000432057 GMNNO75496 209 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 SMNDC1O75940 238 aaKnown RBP eCLIP18.8■□□□□ 0.6
VRK2-205ENST00000432057 GBAP04062 536 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 FCGR1AP12314 374 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 NDUFV2P19404 249 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 HSD17B2P37059 387 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 HPCAL1P37235 193 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 HSPA13P48723 471 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 GZMMP51124 257 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 HNRNPFP52597 415 aaKnown RBP18.8■□□□□ 0.6
VRK2-205ENST00000432057 CLDN2P57739 230 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 TMEM31Q5JXX7 168 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 TMIGD1Q6UXZ0 262 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 USP30Q70CQ3 517 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 SLC44A3Q8N4M1 653 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 TNIP2Q8NFZ5 429 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 SMPDL3AQ92484 453 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 STARD8Q92502 1023 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 UBE2E3Q969T4 207 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 PANX1Q96RD7 426 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 DUSP26Q9BV47 211 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 TTYH1Q9H313 450 aaPredicted RBP18.8■□□□□ 0.6
VRK2-205ENST00000432057 Q9H521 79 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 FGF22Q9HCT0 170 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 LIMD1Q9UGP4 676 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 SCOCQ9UIL1 159 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 CA5BQ9Y2D0 317 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 C7orf72A4D263 438 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 POM121BA6NF01 834 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 PRR19A6NJB7 356 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 CXCR6O00574 342 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 CPSF4O95639 269 aaKnown RBP18.8■□□□□ 0.6
VRK2-205ENST00000432057 ZCCHC18P0CG32 403 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 ACADMP11310 421 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 PIK3CBP42338 1070 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 TRPC1P48995 793 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 PHEXP78562 749 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 RBBP5Q15291 538 aaKnown RBP18.8■□□□□ 0.6
VRK2-205ENST00000432057 LRIT3Q3SXY7 679 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 GALNT18Q6P9A2 607 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 KRT78Q8N1N4 520 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 LINC01555Q8NAE3 123 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 ZNF597Q96LX8 424 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 RNF145Q96MT1 663 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 GORASP2Q9H8Y8 452 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 CARS2Q9HA77 564 aaKnown RBP18.8■□□□□ 0.6
VRK2-205ENST00000432057 PELI2Q9HAT8 420 aa18.8■□□□□ 0.6
VRK2-205ENST00000432057 ARHGAP10A1A4S6 786 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 GABRR3A8MPY1 467 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 CCT8P50990 548 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 ZNF763Q0D2J5 394 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 CLCA4Q14CN2 919 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 CPTPQ5TA50 214 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 ZBTB49Q6ZSB9 765 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 ZNF551Q7Z340 670 aaPredicted RBP18.79■□□□□ 0.6
VRK2-205ENST00000432057 MARVELD2Q8N4S9 558 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 FAM86B1Q8N7N1 296 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 DNASE1L2Q92874 299 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 CENPNQ96H22 339 aaPredicted RBP18.79■□□□□ 0.6
VRK2-205ENST00000432057 CAMK1GQ96NX5 476 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 XKR8Q9H6D3 395 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 WASH6PQ9NQA3 447 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 SIRT5Q9NXA8 310 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 ADGRE2Q9UHX3 823 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 EXO1Q9UQ84 846 aaKnown RBP18.79■□□□□ 0.6
VRK2-205ENST00000432057 ERVK-11Q9UQG0 969 aa18.79■□□□□ 0.6
VRK2-205ENST00000432057 OR52A4PA6NMU1 304 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms