RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 IDSP22304 550 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 AK4P27144 223 aaPredicted RBP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 PTPN6P29350 595 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 TIA1P31483 386 aaKnown RBP eCLIP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 SMAD4Q13485 552 aaKnown RBP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 ARHGAP19Q14CB8 494 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 SPIN4Q56A73 249 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 COMMD6Q7Z4G1 85 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 FAM129CQ86XR2 697 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 ADGRG5Q8IZF4 528 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 CLECL1Q8IZS7 167 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 PRAP1Q96NZ9 151 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 SORBS1Q9BX66 1292 aaKnown RBP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 KCNH6Q9H252 994 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 RMND5AQ9H871 391 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 RMI1Q9H9A7 625 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 C2orf42Q9NWW7 574 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 KNL1Q8NG31 2342 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 A0A096LPI6 279 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 FAM149AA5PLN7 773 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 FOXE1O00358 373 aaPredicted RBP16.02■□□□□ 0.16
USHBP1-203ENST00000431146 RFXANKO14593 260 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 FPGTO14772 594 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 PEX1O43933 1283 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 EML2O95834 649 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 PIM1P11309 404 aaPredicted RBP16.02■□□□□ 0.16
USHBP1-203ENST00000431146 PSMA4P25789 261 aaKnown RBP16.02■□□□□ 0.16
USHBP1-203ENST00000431146 WNT3P56703 355 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 SLC14A1Q13336 389 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 TBC1D25Q3MII6 688 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 OR2T12Q8NG77 320 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 CCL4L1Q8NHW4 92 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 SMPDL3AQ92484 453 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 SEPHS2Q99611 448 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 CHCHD3Q9NX63 227 aaKnown RBP16.02■□□□□ 0.16
USHBP1-203ENST00000431146 ERVK-11Q9UQG0 969 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 INVSQ9Y283 1065 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 MAN2B2Q9Y2E5 1009 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 PCDHB3Q9Y5E6 796 aa16.02■□□□□ 0.16
USHBP1-203ENST00000431146 PRR19A6NJB7 356 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 GABRR3A8MPY1 467 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 SCAMP2O15127 329 aaKnown RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 MTAPQ13126 283 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 LAPTM5Q13571 262 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 FBXO43Q4G163 708 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 LRIF1Q5T3J3 769 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 TICAM1Q8IUC6 712 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 PLD3Q8IV08 490 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 ANKRD53Q8N9V6 530 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 ICA1LQ8NDH6 482 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 FIG4Q92562 907 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 EME1Q96AY2 570 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 BIRC7Q96CA5 298 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 GAS2L1Q99501 681 aaPredicted RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 EFHD1Q9BUP0 239 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 PHF7Q9BWX1 381 aaPredicted RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 ARMC1Q9NVT9 282 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 VCANP13611 3396 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 TXNDC9O14530 226 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 ERN1O75460 977 aaKnown RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 CPSF4O95639 269 aaKnown RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 HOXB9P17482 250 aaPredicted RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 MC1RQ01726 317 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 SRSF11Q05519 484 aaKnown RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 FXNQ16595 210 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 UAP1L1Q3KQV9 507 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 LRIT3Q3SXY7 679 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 TMEM132CQ8N3T6 1108 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 FRMD1Q8N878 549 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 ADCY4Q8NFM4 1077 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 OR52E1Q8NGJ3 308 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 NELL1Q92832 810 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 SCARF2Q96GP6 870 aaPredicted RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 GBP5Q96PP8 586 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 OR2M4Q96R27 311 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 PANX1Q96RD7 426 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 CIB1Q99828 191 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 CPPED1Q9BRF8 314 aaPredicted RBP16.01■□□□□ 0.15
USHBP1-203ENST00000431146 MUC13Q9H3R2 512 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 SPATA7Q9P0W8 599 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 TBC1D29Q9UFV1 150 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 FANCMQ8IYD8 2048 aa16.01■□□□□ 0.15
USHBP1-203ENST00000431146 ARHGEF17Q96PE2 2063 aaPredicted RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 TRBV23OR9-2A0A075B6M9 112 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 SCN2BO60939 215 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 TBX6O95947 436 aaPredicted RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 KLK1P06870 262 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 HNRNPA2B1P22626 353 aaKnown RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 NFATC4Q14934 902 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 RPE65Q16518 533 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 NRF1Q16656 503 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 AASDHQ4L235 1098 aaPredicted RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 ADCK2Q7Z695 626 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 TRIM69Q86WT6 500 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 TMEM126BQ8IUX1 230 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 KRT78Q8N1N4 520 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 NSMCE2Q96MF7 247 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 C6orf106Q9H6K1 298 aaPredicted RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 KAT8Q9H7Z6 458 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms