RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 EGFL8Q99944 293 aa16.7■□□□□ 0.26
NUP50-208ENST00000430547 ILKAPQ9H0C8 392 aaPredicted RBP16.7■□□□□ 0.26
NUP50-208ENST00000430547 GPAMQ9HCL2 828 aa16.7■□□□□ 0.26
NUP50-208ENST00000430547 NOVA2Q9UNW9 492 aaKnown RBP16.7■□□□□ 0.26
NUP50-208ENST00000430547 NSG1A0A0A6YYJ2 146 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 NPEPPSL1A6NEC2 478 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 H0YIG0 161 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 HPP00738 406 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 BCL6P41182 706 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 CD97P48960 835 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 TAS2R39P59534 338 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 CKAP4Q07065 602 aaKnown RBP16.69■□□□□ 0.26
NUP50-208ENST00000430547 CBLBQ13191 982 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 CSHL1Q14406 222 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 ZNF460Q14592 562 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 MFSD4BQ5TF39 518 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 AGAP7PQ5VUJ5 663 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 SBSNQ6UWP8 590 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 TMEM207Q6UWW9 146 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 VN1R4Q7Z5H5 301 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 ADAMTSL2Q86TH1 951 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 CCDC25Q86WR0 208 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 OR9A4Q8NGU2 314 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 ZCCHC10Q8TBK6 192 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 SLC13A3Q8WWT9 602 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 ANKRD7Q92527 254 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 C8orf44Q96CB5 159 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 TSPAN17Q96FV3 270 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
NUP50-208ENST00000430547 AGAP4Q96P64 663 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 TGIF2Q9GZN2 237 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 LHPPQ9H008 270 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 POPDC3Q9HBV1 291 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 ZNF160Q9HCG1 818 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 ANKHQ9HCJ1 492 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 CTNNAL1Q9UBT7 734 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 B3GNT3Q9Y2A9 372 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 DYRK1BQ9Y463 629 aa16.69■□□□□ 0.26
NUP50-208ENST00000430547 PRRC2CQ9Y520 2896 aaKnown RBP16.69■□□□□ 0.26
NUP50-208ENST00000430547 FLNBO75369 2602 aaKnown RBP16.68■□□□□ 0.26
NUP50-208ENST00000430547 CDC7O00311 574 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 PCDH17O14917 1159 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 NSA2O95478 260 aaKnown RBP16.68■□□□□ 0.26
NUP50-208ENST00000430547 UQCRHP07919 91 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 IL1RNP18510 177 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 PLTPP55058 493 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 POU4F1Q01851 419 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 MEF2AQ02078 507 aaPredicted RBP16.68■□□□□ 0.26
NUP50-208ENST00000430547 INPP5JQ15735 1006 aaPredicted RBP16.68■□□□□ 0.26
NUP50-208ENST00000430547 SYT16Q17RD7 645 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 FAAH2Q6GMR7 532 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 IGFL3Q6UXB1 125 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 LAPTM4BQ86VI4 370 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 IQCKQ8N0W5 287 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 ARHGEF39Q8N4T4 335 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 MFSD9Q8NBP5 474 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 SLC5A11Q8WWX8 675 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 MACROD1Q9BQ69 325 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 SLC29A3Q9BZD2 475 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 EPS8L2Q9H6S3 715 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 MKL2Q9ULH7 1088 aa16.68■□□□□ 0.26
NUP50-208ENST00000430547 MRPS2Q9Y399 296 aaKnown RBP16.68■□□□□ 0.26
NUP50-208ENST00000430547 SETXQ7Z333 2677 aaKnown RBP16.68■□□□□ 0.26
NUP50-208ENST00000430547 RP1L1Q8IWN7 2480 aaPredicted RBP16.68■□□□□ 0.26
NUP50-208ENST00000430547 SPENQ96T58 3664 aaKnown RBP16.67■□□□□ 0.26
NUP50-208ENST00000430547 SHANK1Q9Y566 2161 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 FLNCQ14315 2725 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 TCRBV9S1A1TA0A576 114 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 NDUFS4O43181 175 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 OR1F1O43749 312 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 PIAS1O75925 651 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 SERPIND1P05546 499 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 GSTA2P09210 222 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 SKP1P63208 163 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 MAT1AQ00266 395 aaKnown RBP16.67■□□□□ 0.26
NUP50-208ENST00000430547 EEF1A2Q05639 463 aaKnown RBP16.67■□□□□ 0.26
NUP50-208ENST00000430547 PPP1R3AQ16821 1122 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 ATG9BQ674R7 924 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 TMEM214Q6NUQ4 689 aaKnown RBP16.67■□□□□ 0.26
NUP50-208ENST00000430547 C3orf62Q6ZUJ4 267 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 NDUFAF7Q7L592 441 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 CEP97Q8IW35 865 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 ZC3H7AQ8IWR0 971 aaKnown RBP16.67■□□□□ 0.26
NUP50-208ENST00000430547 CTAGE3PQ8IX95 158 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 Q8NA96 180 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 GALNT11Q8NCW6 608 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 ABHD11Q8NFV4 315 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 METTL21AQ8WXB1 218 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 TM4SF19Q96DZ7 209 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 TSNARE1Q96NA8 513 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 CPNE1Q99829 537 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 PHACTR1Q9C0D0 580 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 RIC8BQ9NVN3 520 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 IKZF3Q9UKT9 509 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 OARD1Q9Y530 152 aa16.67■□□□□ 0.26
NUP50-208ENST00000430547 TRBC2A0A5B9 178 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 LCMT2O60294 686 aaKnown RBP16.66■□□□□ 0.26
NUP50-208ENST00000430547 STMN1P16949 149 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 GP5P40197 560 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms