RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PLD6Q8N2A8 252 aaKnown RBP16.17■□□□□ 0.18
UBE3D-204ENST00000430071 TEX19Q8NA77 164 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 MCOLN3Q8TDD5 553 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 ZNF480Q8WV37 535 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 ZUFSPQ96AP4 578 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 SELENOSQ9BQE4 189 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 DPH7Q9BTV6 452 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 ABCF3Q9NUQ8 709 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 UTP6Q9NYH9 597 aaKnown RBP16.17■□□□□ 0.18
UBE3D-204ENST00000430071 SPATA7Q9P0W8 599 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 GPN3Q9UHW5 284 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-204ENST00000430071 NOVA2Q9UNW9 492 aaKnown RBP16.17■□□□□ 0.18
UBE3D-204ENST00000430071 SRPK3Q9UPE1 567 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 SPTBN1Q01082 2364 aaKnown RBP16.16■□□□□ 0.18
UBE3D-204ENST00000430071 A0A1W2PPM1 405 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 TLDC2A0PJX2 215 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 OR2A25A4D2G3 310 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 TARM1B6A8C7 271 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 DSCR3O14972 297 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 IMPA1P29218 277 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 FOLR3P41439 243 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 KCNC1P48547 511 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 SSPNQ14714 243 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 ADAMTSL2Q86TH1 951 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 LRRC56Q8IYG6 542 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-204ENST00000430071 OR2Y1Q8NGV0 311 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 KIAA1191Q96A73 305 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 GPR78Q96P69 363 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 TMEM109Q9BVC6 243 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 MFRPQ9BY79 579 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 NMRAL1Q9HBL8 299 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 INTS7Q9NVH2 962 aaKnown RBP16.16■□□□□ 0.18
UBE3D-204ENST00000430071 ZNF358Q9NW07 568 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 LUZP4Q9P127 313 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 CTSFQ9UBX1 484 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 PCDHGA9Q9Y5G4 932 aaKnown RBP16.16■□□□□ 0.18
UBE3D-204ENST00000430071 KLK4Q9Y5K2 254 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 MAU2Q9Y6X3 613 aa16.16■□□□□ 0.18
UBE3D-204ENST00000430071 SPTAN1Q13813 2472 aaKnown RBP16.16■□□□□ 0.18
UBE3D-204ENST00000430071 A0A1B0GX78 115 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 KLHL2O95198 593 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ENO2P09104 434 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-204ENST00000430071 TFEBP19484 476 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 PGDP52209 483 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 PNLIPRP1P54315 467 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ZNF844Q08AG5 666 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ARHGAP19Q14CB8 494 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ZXDCQ2QGD7 858 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ZC3H12BQ5HYM0 836 aaKnown RBP16.15■□□□□ 0.18
UBE3D-204ENST00000430071 RNF44Q7L0R7 432 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 OVCH1Q7RTY7 1134 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ISCA2Q86U28 154 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 SHISA5Q8N114 240 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 CCDC138Q96M89 665 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ROPN1BQ9BZX4 212 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ALG9Q9H6U8 611 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ROPN1Q9HAT0 212 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-204ENST00000430071 CUEDC1Q9NWM3 386 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-204ENST00000430071 ARL15Q9NXU5 204 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 TAC3Q9UHF0 121 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 LGALS13Q9UHV8 139 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 PADI2Q9Y2J8 665 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 OARD1Q9Y530 152 aa16.15■□□□□ 0.18
UBE3D-204ENST00000430071 FITM1A5D6W6 292 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 E7ENX8 843 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 H0YGG7 62 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 GOLGA8RI6L899 631 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 FFAR3O14843 346 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 GPR42O15529 346 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 FKBP9O95302 570 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 GUCA1CO95843 209 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 ONECUT2O95948 504 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 STATHP02808 62 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 EIF2S1P05198 315 aaKnown RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 H2AFXP16104 143 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 CMPK1P30085 196 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 GLRBP48167 497 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 CD97P48960 835 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 AP1S2P56377 157 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 ARF3P61204 181 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 TAP2Q03519 686 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 SRSF1Q07955 248 aaKnown RBP eCLIP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 GRM7Q14831 915 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 NKG7Q16617 165 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 FAM83EQ2M2I3 478 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 PRR30Q53SZ7 412 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 SH2D5Q6ZV89 423 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 MED25Q71SY5 747 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 PAQR7Q86WK9 346 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 RAB43Q86YS6 212 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 PLD3Q8IV08 490 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 RAB42Q8N4Z0 105 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 AMER2Q8N7J2 671 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 RBMXL3Q8N7X1 1067 aaKnown RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 TMEM102Q8N9M5 508 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 SMPDL3AQ92484 453 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 MIB2Q96AX9 1013 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 ZBTB9Q96C00 473 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 C10orf90Q96M02 699 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 ZIM3Q96PE6 472 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms