RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CRCPO75575 148 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 AKR7A3O95154 331 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 TRIM16O95361 564 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 LDLRP01130 860 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 LIPFP07098 398 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 HEXBP07686 556 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 FAM106CPP0CH98 169 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 FUT1P19526 365 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 ALDH1B1P30837 517 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 AKT2P31751 481 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 CHRNA3P32297 505 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 DUTP33316 252 aaKnown RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 HSD17B3P37058 310 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 NPBWR1P48145 328 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 ARFIP1P53367 373 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 MLLT10P55197 1068 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 TRA2BP62995 288 aaKnown RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 PHEXP78562 749 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 ELFN2Q5R3F8 820 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 CCNYL2Q5T2Q4 361 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 PRAMEF7Q5VXH5 474 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 PM20D1Q6GTS8 502 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 OR6B2Q6IFH4 312 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 TRMT1LQ7Z2T5 733 aaKnown RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 SMIM29Q86T20 159 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 RPAINQ86UA6 219 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 MEX3DQ86XN8 651 aaKnown RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 TMEM139Q8IV31 216 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 DCUN1D3Q8IWE4 304 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 FBXW8Q8N3Y1 598 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 KLHDC1Q8N7A1 406 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 RASGEF1AQ8N9B8 481 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 DMBX1Q8NFW5 382 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 OR13A1Q8NGR1 328 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 PSMA8Q8TAA3 256 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 PPP4R1Q8TF05 950 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 THOC1Q96FV9 657 aaKnown RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 NODALQ96S42 347 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 NDNQ99608 321 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 PKP2Q99959 881 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 DDX50Q9BQ39 737 aaKnown RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 CCSER1Q9C0I3 900 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 LRRC4Q9HBW1 653 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 NGBQ9NPG2 151 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 GKN1Q9NS71 199 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 FAM212BQ9NTI7 297 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF701Q9NV72 531 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 COMMD8Q9NX08 183 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 DCAF16Q9NXF7 216 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 PTTG2Q9NZH5 202 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 HMG20BQ9P0W2 317 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 TXNDC16Q9P2K2 825 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 EXOC7Q9UPT5 735 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 RRP15Q9Y3B9 282 aaKnown RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 YIPF1Q9Y548 306 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 MYH14Q7Z406 1995 aaKnown RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 A0A087X0K7 114 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 TRAV24A0A0B4J272 114 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 ILVBLA1L0T0 632 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 ANKDD1BA6NHY2 528 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 C15orf62A8K5M9 175 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 ANKRD66B4E2M5 251 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 E9PI62 339 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 CACNB4O00305 520 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 P2RY10O00398 339 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 NTN3O00634 580 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 SLC22A2O15244 555 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 LINC01565O15544 149 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 ADAM12O43184 909 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 LANCL1O43813 399 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 XPNPEP2O43895 674 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 STBD1O95210 358 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 LUC7L3O95232 432 aaKnown RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 DIRAS3O95661 229 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 MT-ATP6P00846 226 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 UMODP07911 640 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 TPM2P07951 284 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 NUDT17P0C025 328 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 NCF1P14598 390 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 CKMT2P17540 419 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 GM2AP17900 193 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 CYP2A7P20853 494 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 ACP1P24666 158 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 AHRP35869 848 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 ACAA2P42765 397 aaKnown RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 IER3P46695 156 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 DVL1P1P54792 670 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 CX3CL1P78423 397 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 KCNJ10P78508 379 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 PMP22Q01453 160 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 AKAP17AQ02040 695 aaKnown RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 GK2Q14410 553 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 MAPK11Q15759 364 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 XKR3Q5GH77 459 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 NDUFAF5Q5TEU4 345 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 STPG1Q5TH74 334 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 OR7E24Q6IFN5 339 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 LINGO4Q6UY18 593 aa2.71□□□□□ -1.98
HMGB1P9-201ENST00000429856 KCTD8Q6ZWB6 473 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms