RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RELAQ04206 551 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 TLE4Q04727 773 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 SNX1Q13596 522 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 THEMIS2Q5TEJ8 643 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 SPINK14Q6IE38 97 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 H3F3CQ6NXT2 135 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 RAD9BQ6WBX8 426 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 PRSS41Q7RTY9 318 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 ANKRD37Q7Z713 158 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 TMEM178AQ8NBL3 297 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 C1orf54Q8WWF1 131 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 C14orf79Q96F83 325 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 FRMD6Q96NE9 622 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 EBNA1BP2Q99848 306 aaKnown RBP17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 SPOCK3Q9BQ16 436 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 FRMD8P1Q9BZ68 369 aaPredicted RBP17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 IL22Q9GZX6 179 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 PAK5Q9P286 719 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 GALPQ9UBC7 116 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 CRYL1Q9Y2S2 319 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 ASPDHA6ND91 283 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 E5RI56 91 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 H0YIG0 161 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 PFDN6O15212 129 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZNHIT1O43257 154 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 NSA2O95478 260 aaKnown RBP17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 SYF2O95926 243 aaKnown RBP17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 ESR1P03372 595 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 CYC1P08574 325 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZSCAN5DPP0CG00 497 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 ARNTP27540 789 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 XCR1P46094 333 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 OC90Q02509 493 aaPredicted RBP17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 PTK6Q13882 451 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 EXT1Q16394 746 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 RNF187Q5TA31 235 aaPredicted RBP17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 CES3Q6UWW8 571 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 SPNS3Q6ZMD2 512 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 MEX3BQ6ZN04 569 aaKnown RBP17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 GALNTL5Q7Z4T8 443 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 SHISA5Q8N114 240 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 OR51Q1Q8NH59 317 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 MCOLN3Q8TDD5 553 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 AGAP11Q8TF27 550 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZNF480Q8WV37 535 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 SCMH1Q96GD3 660 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 BFARQ9NZS9 450 aa17.27■□□□□ 0.36
UPK3BP1-201ENST00000428678 INTS1Q8N201 2190 aaKnown RBP17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 GABRR3A8MPY1 467 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 E7ENX8 843 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 H7BY64 318 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 ASNA1O43681 348 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 MAN1A2O60476 641 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 IL1RNP18510 177 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 AGTR2P50052 363 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 HSF1Q00613 529 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 TAP2Q03519 686 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 KCNJ11Q14654 390 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 TYSND1Q2T9J0 566 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 SEL1L2Q5TEA6 688 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 C3P1Q6ZMU1 363 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 SIAH3Q8IW03 269 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 GHDCQ8N2G8 530 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 SLC5A8Q8N695 610 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 HORMAD2Q8N7B1 307 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 FAM98AQ8NCA5 519 aaKnown RBP17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 M1APQ8TC57 530 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 MFSD3Q96ES6 412 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 HES6Q96HZ4 224 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 PRAP1Q96NZ9 151 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 NPAS2Q99743 824 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 MCCC2Q9HCC0 563 aa17.26■□□□□ 0.35
UPK3BP1-201ENST00000428678 SGK494L7N484 410 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 SP1P08047 785 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 MGAT1P26572 445 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 RPL22P35268 128 aaKnown RBP17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 NPY2RP49146 381 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 CSNK1G2P78368 415 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 ACTN3Q08043 901 aaPredicted RBP17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 MEI1Q5TIA1 1274 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 PAPD4Q6PIY7 484 aaKnown RBP17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 CA5BP1Q8WTZ4 195 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 TCF12Q99081 682 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 MACROD1Q9BQ69 325 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 TRIM51Q9BSJ1 452 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 MMP25Q9NPA2 562 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 EIF2B3Q9NR50 452 aaKnown RBP17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 PPT2Q9UMR5 302 aa17.25■□□□□ 0.35
UPK3BP1-201ENST00000428678 PRRG2O14669 202 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 TSPAN12O95859 305 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 BCL6P41182 706 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 TAS2R50P59544 299 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 KIF5AQ12840 1032 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 ABRAXAS2Q15018 415 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 MAPKAPK3Q16644 382 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 SFT2D3Q587I9 215 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 VN1R4Q7Z5H5 301 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms