RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RPS6KA6Q9UK32 745 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 A0A1W2PQL4 384 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 I6L893 689 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 FZD9O00144 591 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 SCAMP3O14828 347 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 ALDH1A1P00352 501 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 IL1AP01583 271 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 CYP17A1P05093 508 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 NPR3P17342 541 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 HLA-FP30511 346 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 STAT5BP51692 787 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 GPR85P60893 370 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 NFE2L1Q14494 772 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 NR6A1Q15406 480 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 FAM174BQ3ZCQ3 159 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 BICRALQ6AI39 1079 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 RETSATQ6NUM9 610 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 B3GNT7Q8NFL0 401 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 OR6B3Q8NGW1 331 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 NUDT8Q8WV74 236 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 RIT1Q92963 219 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 SECISBP2Q96T21 854 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 KATNAL1Q9BW62 490 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 ZNF416Q9BWM5 594 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 NT5DC2Q9H857 520 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 NLKQ9UBE8 527 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 KIF25Q9UIL4 384 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 CLCA3PQ9Y6N3 262 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 SCN1AP35498 2009 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 TRAV19A0A0A6YYK7 116 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 hCG_1807616A0A1W2PRN6 198 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 HYKKA2RU49 373 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 INMT-MINDY4F8WBC2 141 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 H3BM21 787 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 QSOX1O00391 747 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 ESR1P03372 595 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 PROS1P07225 676 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 SLC2A2P11168 524 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 LHCGRP22888 699 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 PSMA1P25786 263 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 PTBP1P26599 531 aaKnown RBP eCLIP15.57■□□□□ 0.086e-8■■■■■ 34.6
C9orf3-206ENST00000428313 CRYBB2P43320 205 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 ERVK-21P61565 698 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 SF3A2Q15428 464 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 AP5B1Q2VPB7 878 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 TTLL9Q3SXZ7 439 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 LRIF1Q5T3J3 769 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 METTL3Q86U44 580 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 LDB1Q86U70 411 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 GLCCI1Q86VQ1 547 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 CRYBG2Q8N1P7 616 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 CHCHD4Q8N4Q1 142 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 OR4F6Q8NGB9 312 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 WDR48Q8TAF3 677 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 NDRG1Q92597 394 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 CELF6Q96J87 481 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 PELOQ9BRX2 385 aaKnown RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 CD244Q9BZW8 370 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 MARCH4Q9P2E8 410 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-206ENST00000428313 CRYL1Q9Y2S2 319 aa15.57■□□□□ 0.08
C9orf3-206ENST00000428313 SH3D21A4FU49 640 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 CHP2O43745 196 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ACSL4O60488 711 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 NUP62P37198 522 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 MAN2A2P49641 1150 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 VLDLRP98155 873 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 FLI1Q01543 452 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 HSF2Q03933 536 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 Q6ZPB1 254 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 EIF3MQ7L2H7 374 aaKnown RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 OVCH2Q7RTZ1 564 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 FAM83AQ86UY5 434 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 TIGD4Q8IY51 512 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 LRRC17Q8N6Y2 441 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 OR6P1Q8NGX9 317 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 PPP3R2Q96LZ3 170 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 FAM129BQ96TA1 746 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ELOVL6Q9H5J4 265 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 POLMQ9NP87 494 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 PCDHB16Q9NRJ7 776 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 RDH8Q9NYR8 311 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 CPNE7Q9UBL6 633 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ZNF112Q9UJU3 913 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 OGDHLQ9ULD0 1010 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 PCDHGB3Q9Y5G1 929 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 CFAP20Q9Y6A4 193 aaKnown RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 E9PAM4 449 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ADAM11O75078 769 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 DIRAS1O95057 198 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 EPHA5P54756 1037 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 PURAQ00577 322 aaKnown RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 GTDC1Q4AE62 458 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ERICH5Q6P6B1 374 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 METAP1DQ6UB28 335 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 TMEM107Q6UX40 140 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 LRRC71Q8N4P6 559 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ATPAF2Q8N5M1 289 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 PNPLA1Q8N8W4 532 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 SMG7Q92540 1137 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms