RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 KCT2Q8NC54 265 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ZNF485Q8NCK3 441 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 B3GALNT2Q8NCR0 500 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ZFYVE19Q96K21 471 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SAMD11Q96NU1 681 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CAMKK2Q96RR4 588 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 UCK2Q9BZX2 261 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 OR51B5Q9H339 312 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 KLF15Q9UIH9 416 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 KCNMB2Q9Y691 235 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CDH10Q9Y6N8 788 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 G6PDP11413 515 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PTPRAP18433 802 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 HOXA11P31270 313 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 STC1P52823 247 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 DGKQP52824 942 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 EFNB1P98172 346 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CSTF3Q12996 717 aaKnown RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 SEMA3AQ14563 771 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CACHD1Q5VU97 1274 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 HSDL2Q6YN16 418 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 LRRTM3Q86VH5 581 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 P3H2Q8IVL5 708 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TTC29Q8NA56 475 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 MYDGFQ969H8 173 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SENP8Q96LD8 212 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 FEVQ99581 238 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TRIM39Q9HCM9 518 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 MIOSQ9NXC5 875 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 MARCH4Q9P2E8 410 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 MAP1AP78559 2803 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 EFCAB10A6NFE3 127 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 A8MXK9 166 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 G3V3Q6 166 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 M0QYT0 321 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 DBTP11182 482 aaKnown RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 ARSBP15848 533 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 DDX5P17844 614 aaKnown RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 HK1P19367 917 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SAT1P21673 171 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 MAPK12P53778 367 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TPI1P60174 286 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ELOAQ14241 798 aaKnown RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 SPHARQ15513 63 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ATP6AP1LQ52LC2 224 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 HSD17B12Q53GQ0 312 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CDKL4Q5MAI5 379 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ALKAL1Q6UXT8 129 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ADGRG3Q86Y34 549 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TMC8Q8IU68 726 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 RNF135Q8IUD6 432 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TRIM48Q8IWZ4 208 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 FBXO39Q8N4B4 442 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TMEM245Q9H330 911 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 KRT84Q9NSB2 600 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 UBP1Q9NZI7 540 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CFAP47Q6ZTR5 3102 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CIB4A0PJX0 185 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 OR6C70A6NIJ9 312 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PLD2O14939 933 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 B4GALT5O43286 388 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 HBP1O60381 514 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CAPN1P07384 714 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 BPIP17213 487 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PRKACGP22612 351 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 HMGB2P26583 209 aaKnown RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 FMO3P31513 532 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CLDN20P56880 219 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 S100A12P80511 92 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 AP5B1Q2VPB7 878 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ARMCX4Q5H9R4 360 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 FRMPD2BQ6IN97 320 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 LINC00518Q8N0U6 118 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 UMODL1-AS1Q8N2C9 162 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 BMPERQ8N8U9 685 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 DCBLD1Q8N8Z6 715 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 NETO1Q8TDF5 533 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 FAM149B1Q96BN6 582 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ZSWIM3Q96MP5 696 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 MED18Q9BUE0 208 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 C11orf54Q9H0W9 315 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 TAS2R13Q9NYV9 303 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SLC2A6Q9UGQ3 507 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TFECO14948 347 aaPredicted RBP4.97□□□□□ -1.61
RIF1-203ENST00000428287 KCNK5O95279 499 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 F7P08709 466 aaPredicted RBP4.97□□□□□ -1.61
RIF1-203ENST00000428287 ATF6P18850 670 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 ZNF33BQ06732 778 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 SIM2Q14190 667 aaPredicted RBP4.97□□□□□ -1.61
RIF1-203ENST00000428287 GALEQ14376 348 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 STXBP2Q15833 593 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 ARSKQ6UWY0 536 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 NLRP8Q86W28 1048 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 LAX1Q8IWV1 398 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 SLC6A13Q9NSD5 602 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 NDUFAF4Q9P032 175 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 VPS9D1Q9Y2B5 631 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 HCN4Q9Y3Q4 1203 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 MEN1O00255 615 aa4.97□□□□□ -1.61
RIF1-203ENST00000428287 ADAM11O75078 769 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms