RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 COMMD6Q7Z4G1 85 aa25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 ABI3BPQ7Z7G0 1075 aa25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 OR7A2PQ8NGA2 310 aa25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 CDC26Q8NHZ8 85 aa25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 SLCO4A1Q96BD0 722 aa25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 ZNF570Q96NI8 536 aa25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 PITHD1Q9GZP4 211 aaPredicted RBP25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 COPS7BQ9H9Q2 264 aaPredicted RBP25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 AP4S1Q9Y587 144 aa25.56■■□□□ 1.68
SH3GL3-202ENST00000427482 PRAMEF26H0Y7S4 382 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 SCAMP2O15127 329 aaKnown RBP25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 COX7A2P14406 83 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 IL9P15248 144 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 AK4P27144 223 aaPredicted RBP25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 PEX2P28328 305 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 SRP54P61011 504 aaKnown RBP25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 RBBP5Q15291 538 aaKnown RBP25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 IRAK1BP1Q5VVH5 260 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 LPCAT4Q643R3 524 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 Q6ZSR6 202 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 TMEM126BQ8IUX1 230 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 LILRA2Q8N149 483 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 GOLM1Q8NBJ4 401 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 OR8J2Q8NGG1 315 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 ZNF184Q99676 751 aaPredicted RBP25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 REXO4Q9GZR2 422 aaKnown RBP25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 VCX3BQ9H321 246 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 KIR3DX1Q9H7L2 352 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 NT5DC2Q9H857 520 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 PCOLCE2Q9UKZ9 415 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 USP22Q9UPT9 525 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 PCDHB3Q9Y5E6 796 aa25.55■■□□□ 1.68
SH3GL3-202ENST00000427482 PRAMEF33A0A0G2JMD5 474 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 EML2O95834 649 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 PTX3P26022 381 aaPredicted RBP25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 OR4D2P58180 307 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 CYP4F3Q08477 520 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 GAS6Q14393 721 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 ALG11Q2TAA5 492 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 GTDC1Q4AE62 458 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 ANKRD46Q86W74 232 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 SPPL2CQ8IUH8 684 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 METTL4Q8N3J2 472 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 OR2A1Q8NGT9 310 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 NELL1Q92832 810 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 SH3GL1Q99961 368 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 INPP5KQ9BT40 448 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 TMEM168Q9H0V1 697 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 SLC6A13Q9NSD5 602 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 WSB2Q9NYS7 404 aaPredicted RBP25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 PCDHB14Q9Y5E9 798 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 PCDHB11Q9Y5F2 797 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 COLEC10Q9Y6Z7 277 aa25.54■■□□□ 1.68
SH3GL3-202ENST00000427482 GNG14A0A1W2PPG7 69 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 H7BY64 318 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 B3GALT4O96024 378 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 ACADSP16219 412 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 ATP6V1C1P21283 382 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 PTPN6P29350 595 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 OXTRP30559 389 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 RABIFP47224 123 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 WNT3P56703 355 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 HKDC1Q2TB90 917 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 OGFRL1Q5TC84 451 aaPredicted RBP25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 TSTD1Q8NFU3 115 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 CCL4L1Q8NHW4 92 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 NAF1Q96HR8 494 aaKnown RBP25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 PRAP1Q96NZ9 151 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 PKP2Q99959 881 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 IKZF5Q9H5V7 419 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 DMTF1Q9Y222 760 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 SNRNP200O75643 2136 aaKnown RBP25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 SAP18O00422 153 aaKnown RBP25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 KDM1AO60341 852 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 RASGRP1O95267 797 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 SERPINB1P30740 379 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 PRDX1Q06830 199 aaKnown RBP25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 ZNF763Q0D2J5 394 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 AASDHQ4L235 1098 aaPredicted RBP25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 IZUMO2Q6UXV1 221 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 TMEM132CQ8N3T6 1108 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 ANKRD53Q8N9V6 530 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 OR13H1Q8NG92 308 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 WDR48Q8TAF3 677 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 BIRC7Q96CA5 298 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 ZNF583Q96ND8 569 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 ECSITQ9BQ95 431 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 KLHL4Q9C0H6 718 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 PIF1Q9H611 641 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 FAM120CQ9NX05 1096 aaKnown RBP25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 AP3M1Q9Y2T2 418 aa25.53■■□□□ 1.68
SH3GL3-202ENST00000427482 SCN2BO60939 215 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 FOSL2P15408 326 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 HPCAL1P37235 193 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 ACTR1BP42025 376 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 CDKN2CP42773 168 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 ACTR1AP61163 376 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 FZD5Q13467 585 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 TCEA2Q15560 299 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 CAMKMTQ7Z624 323 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms