RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 OR13F1Q8NGS4 319 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 OR5K1Q8NHB7 308 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 MBOAT4Q96T53 435 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 TPT1P8Q9HAU6 139 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 TOR4AQ9NXH8 423 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 USE1Q9NZ43 259 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 B4GALT6Q9UBX8 382 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 NOTCH4Q99466 2003 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 ARID1AO14497 2285 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 SLC35F4A4IF30 521 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 M0QX08 132 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 SUV39H1O43463 412 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 EPHB3P54753 998 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 LMAN2Q12907 356 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 SLC14A2Q15849 920 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 BORAQ6PGQ7 559 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 MSRB3Q8IXL7 192 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 CFAP206Q8IYR0 622 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 OSBPL10Q9BXB5 764 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 DCSTAMPQ9H295 470 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 TRPC4Q9UBN4 977 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 PPT2Q9UMR5 302 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 BTBD3Q9Y2F9 522 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 GBF1Q92538 1859 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 CARNS1A5YM72 827 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 E7EQ34 232 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 GSTM1P09488 218 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 DNAJB1P25685 340 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 NR4A2P43354 598 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 CNTN1Q12860 1018 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 GPRC6AQ5T6X5 926 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 NEK5Q6P3R8 708 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 NCEH1Q6PIU2 408 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 BCDIN3DQ7Z5W3 292 aaKnown RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 TMC8Q8IU68 726 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 NXPE1Q8N323 547 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 RELTQ969Z4 430 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 PLD4Q96BZ4 506 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 VPS35Q96QK1 796 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 UHRF1Q96T88 793 aaPredicted RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 FEVQ99581 238 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 OSGEPL1Q9H4B0 414 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 ZNF556Q9HAH1 456 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 EHD3Q9NZN3 535 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 TNNI3P19429 210 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 DAPP51397 102 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 GP2P55259 537 aaKnown RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 MAD2L1Q13257 205 aaPredicted RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 DPY19L1Q2PZI1 675 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 CATSPEREQ5SY80 951 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 CPTPQ5TA50 214 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 FRG2Q64ET8 278 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 XAF1Q6GPH4 301 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 DEF8Q6ZN54 512 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 B3GNT8Q7Z7M8 397 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 MMP21Q8N119 569 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 NAGSQ8N159 534 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 GPR150Q8NGU9 434 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 BPIFB1Q8TDL5 484 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 FRG2BQ96QU4 278 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 RIOK2Q9BVS4 552 aaKnown RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP42-203ENST00000426246 HCFC1R1Q9NWW0 138 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 GIN1Q9NXP7 522 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 PTBP2Q9UKA9 531 aaKnown RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 TNFRSF11BO00300 401 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 UPK1AO00322 258 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 FGBP02675 491 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 HTR1AP08908 422 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 WASP42768 502 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 MTA1Q13330 715 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 CLCA4Q14CN2 919 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 RSBN1Q5VWQ0 802 aaPredicted RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 LGALS12Q96DT0 336 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 SH3YL1Q96HL8 342 aaPredicted RBP12.93□□□□□ -0.34
USP42-203ENST00000426246 ERVK13-1Q9NX77 482 aa12.93□□□□□ -0.34
USP42-203ENST00000426246 GLOD5A6NK44 160 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 LRG1P02750 347 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 DCKP27707 260 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 ZFP36L2P47974 494 aaKnown RBP12.92□□□□□ -0.34
USP42-203ENST00000426246 LEXMQ3ZCV2 418 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 ZNF852Q6ZMS4 543 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 GAREM2Q75VX8 874 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 SPRED2Q7Z698 418 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 ZNF605Q86T29 641 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 FAM20CQ8IXL6 584 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 CELF5Q8N6W0 485 aaKnown RBP12.92□□□□□ -0.34
USP42-203ENST00000426246 CIDECQ96AQ7 238 aaPredicted RBP12.92□□□□□ -0.34
USP42-203ENST00000426246 DACT3Q96B18 629 aaPredicted RBP12.92□□□□□ -0.34
USP42-203ENST00000426246 ZFYVE19Q96K21 471 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
USP42-203ENST00000426246 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 OR51E2Q9H255 320 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 SLC32A1Q9H598 525 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 KAT8Q9H7Z6 458 aaKnown RBP12.92□□□□□ -0.34
USP42-203ENST00000426246 MIEF1Q9NQG6 463 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 RLIMQ9NVW2 624 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms