RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 VN1R1Q9GZP7 353 aa15.29■□□□□ 0.04
COL18A1-205ENST00000423214 C20orf96Q9NUD7 363 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-205ENST00000423214 DHRS7Q9Y394 339 aa15.29■□□□□ 0.04
COL18A1-205ENST00000423214 MAD1L1Q9Y6D9 718 aa15.29■□□□□ 0.04
COL18A1-205ENST00000423214 NCOA6Q14686 2063 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-205ENST00000423214 TRGV8A0A0C4DH27 118 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 SDR42E2A6NKP2 422 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 H7BY64 318 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 PRAMEF2O60811 474 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 UNC5CO95185 931 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 NSA2O95478 260 aaKnown RBP15.28■□□□□ 0.04
COL18A1-205ENST00000423214 IL1RNP18510 177 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 HRH2P25021 359 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 SKIV2L2P42285 1042 aaKnown RBP15.28■□□□□ 0.04
COL18A1-205ENST00000423214 RBPJQ06330 500 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 BTBD16Q32M84 506 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 LRRC8EQ6NSJ5 796 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 TTC27Q6P3X3 843 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 TMEM207Q6UWW9 146 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 LANCL3Q6ZV70 420 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 LMNTD2Q8IXW0 634 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 RASGEF1CQ8N431 466 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 ZCCHC10Q8TBK6 192 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 CD200R1Q8TD46 325 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 MAGOHBQ96A72 148 aaKnown RBP15.28■□□□□ 0.04
COL18A1-205ENST00000423214 PBKQ96KB5 322 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 PRAP1Q96NZ9 151 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 SERPINB12Q96P63 405 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 FAM167BQ9BTA0 163 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 RUBCNLQ9H714 662 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 TMEM184CQ9NVA4 438 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 HCN3Q9P1Z3 774 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 ABI3Q9P2A4 366 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 SEC14L3Q9UDX4 400 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 TRMT6Q9UJA5 497 aaKnown RBP15.28■□□□□ 0.04
COL18A1-205ENST00000423214 PKDREJQ9NTG1 2253 aa15.28■□□□□ 0.04
COL18A1-205ENST00000423214 ZCWPW2A0A1B0GU75 182 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 PABPN1LA6NDY0 278 aaKnown RBP15.27■□□□□ 0.04
COL18A1-205ENST00000423214 GFYI3L273 518 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 EIF3FO00303 357 aaPredicted RBP15.27■□□□□ 0.04
COL18A1-205ENST00000423214 XCR1P46094 333 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 RGS4P49798 205 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 AGTR2P50052 363 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 PTK6Q13882 451 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 UGT3A1Q6NUS8 523 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 MTFR2Q6P444 385 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 ZNF549Q6P9A3 640 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 PRSS41Q7RTY9 318 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 CPEB2Q7Z5Q1 589 aaKnown RBP15.27■□□□□ 0.04
COL18A1-205ENST00000423214 C17orf64Q86WR6 236 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 PALM2Q8IXS6 379 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 CAMKVQ8NCB2 501 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 DNAJB8Q8NHS0 232 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 GABPB2Q8TAK5 448 aaPredicted RBP15.27■□□□□ 0.04
COL18A1-205ENST00000423214 RELTQ969Z4 430 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 MOCOSQ96EN8 888 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 IMMP1LQ96LU5 166 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 PCBD2Q9H0N5 130 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 ANKHQ9HCJ1 492 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 SH3BGRL2Q9UJC5 107 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 MED16Q9Y2X0 877 aa15.27■□□□□ 0.04
COL18A1-205ENST00000423214 IGHV3-20A0A0C4DH32 117 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 A8MUI8 341 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 ZSCAN12O43309 604 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 SLC35G6P0C7Q6 338 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 GRK3P35626 688 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 EFNA3P52797 238 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 CASP6P55212 293 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 MPP1Q00013 466 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 ZNF766Q5HY98 468 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 PLAG1Q6DJT9 500 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 VN1R4Q7Z5H5 301 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 LRRC56Q8IYG6 542 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-205ENST00000423214 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.26■□□□□ 0.031e-12■■■■□ 20.4
COL18A1-205ENST00000423214 MCUQ8NE86 351 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 OR51Q1Q8NH59 317 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 ALKBH8Q96BT7 664 aaKnown RBP15.26■□□□□ 0.03
COL18A1-205ENST00000423214 THAP11Q96EK4 314 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 ZNF354BQ96LW1 612 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 AARSD1Q9BTE6 412 aaKnown RBP15.26■□□□□ 0.03
COL18A1-205ENST00000423214 KCNK13Q9HB14 408 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 STMN3Q9NZ72 180 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 FBXO5Q9UKT4 447 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 CSMD1Q96PZ7 3565 aa15.26■□□□□ 0.03
COL18A1-205ENST00000423214 APCP25054 2843 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 FEZF1A0PJY2 475 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 SGK494L7N484 410 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 CCL21O00585 134 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 RDH16O75452 317 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 C8GP07360 202 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 CCND1P24385 295 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 COILP38432 576 aaPredicted RBP15.25■□□□□ 0.03
COL18A1-205ENST00000423214 PMP22Q01453 160 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 SP140Q13342 867 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 EXT1Q16394 746 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.25■□□□□ 0.03
COL18A1-205ENST00000423214 SP5Q6BEB4 398 aaPredicted RBP15.25■□□□□ 0.03
COL18A1-205ENST00000423214 TMEM214Q6NUQ4 689 aaKnown RBP15.25■□□□□ 0.03
COL18A1-205ENST00000423214 MBOAT1Q6ZNC8 495 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 ANKRD37Q7Z713 158 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms