RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RPS15AP62244 130 aaKnown RBP15.03■□□□□ -0
DDX55-203ENST00000421670 GALNT1Q10472 559 aaPredicted RBP15.03■□□□□ -0
DDX55-203ENST00000421670 LAPTM5Q13571 262 aa15.03■□□□□ -0
DDX55-203ENST00000421670 ZRSR2Q15696 482 aaKnown RBP15.03■□□□□ -0
DDX55-203ENST00000421670 SH2D4BQ5SQS7 431 aa15.03■□□□□ -0
DDX55-203ENST00000421670 OR4N4Q8N0Y3 316 aa15.03■□□□□ -0
DDX55-203ENST00000421670 KRT78Q8N1N4 520 aa15.03■□□□□ -0
DDX55-203ENST00000421670 RNF175Q8N4F7 328 aa15.03■□□□□ -0
DDX55-203ENST00000421670 ZNF781Q8N8C0 355 aa15.03■□□□□ -0
DDX55-203ENST00000421670 AGBL5Q8NDL9 886 aa15.03■□□□□ -0
DDX55-203ENST00000421670 OR2A5Q96R48 311 aa15.03■□□□□ -0
DDX55-203ENST00000421670 EML4Q9HC35 981 aaKnown RBP15.03■□□□□ -0
DDX55-203ENST00000421670 SIDT1Q9NXL6 827 aaKnown RBP15.03■□□□□ -0
DDX55-203ENST00000421670 TIMM22Q9Y584 194 aa15.03■□□□□ -0
DDX55-203ENST00000421670 SCN3AQ9NY46 2000 aa15.03■□□□□ -0
DDX55-203ENST00000421670 EFCAB7A8K855 629 aa15.02■□□□□ -0
DDX55-203ENST00000421670 KLF11O14901 512 aa15.02■□□□□ -0
DDX55-203ENST00000421670 CRCPO75575 148 aa15.02■□□□□ -0
DDX55-203ENST00000421670 CXCR2P25025 360 aa15.02■□□□□ -0
DDX55-203ENST00000421670 SCTRP47872 440 aa15.02■□□□□ -0
DDX55-203ENST00000421670 VSX2P58304 361 aaPredicted RBP15.02■□□□□ -0
DDX55-203ENST00000421670 FOXM1Q08050 763 aa15.02■□□□□ -0
DDX55-203ENST00000421670 TARDBPQ13148 414 aaKnown RBP eCLIP15.02■□□□□ -0
DDX55-203ENST00000421670 TUBB3Q13509 450 aa15.02■□□□□ -0
DDX55-203ENST00000421670 DDX39BQ13838 428 aaKnown RBP15.02■□□□□ -0
DDX55-203ENST00000421670 HIST2H2ACQ16777 129 aaPredicted RBP15.02■□□□□ -0
DDX55-203ENST00000421670 TMTC4Q5T4D3 741 aa15.02■□□□□ -0
DDX55-203ENST00000421670 HIST2H2AA3Q6FI13 130 aa15.02■□□□□ -0
DDX55-203ENST00000421670 MED27Q6P2C8 311 aa15.02■□□□□ -0
DDX55-203ENST00000421670 VN1R4Q7Z5H5 301 aa15.02■□□□□ -0
DDX55-203ENST00000421670 CHCHD4Q8N4Q1 142 aa15.02■□□□□ -0
DDX55-203ENST00000421670 OR7G3Q8NG95 312 aa15.02■□□□□ -0
DDX55-203ENST00000421670 METTL6Q8TCB7 284 aa15.02■□□□□ -0
DDX55-203ENST00000421670 N4BP2L2Q92802 583 aaPredicted RBP15.02■□□□□ -0
DDX55-203ENST00000421670 LIN37Q96GY3 246 aaPredicted RBP15.02■□□□□ -0
DDX55-203ENST00000421670 OR6C1Q96RD1 312 aa15.02■□□□□ -0
DDX55-203ENST00000421670 HBEGFQ99075 208 aa15.02■□□□□ -0
DDX55-203ENST00000421670 MACROD1Q9BQ69 325 aa15.02■□□□□ -0
DDX55-203ENST00000421670 SARGQ9BW04 601 aa15.02■□□□□ -0
DDX55-203ENST00000421670 CHRNA10Q9GZZ6 450 aa15.02■□□□□ -0
DDX55-203ENST00000421670 SLCO1B3Q9NPD5 702 aa15.02■□□□□ -0
DDX55-203ENST00000421670 FGF21Q9NSA1 209 aa15.02■□□□□ -0
DDX55-203ENST00000421670 THAP1Q9NVV9 213 aa15.02■□□□□ -0
DDX55-203ENST00000421670 ZDHHC2Q9UIJ5 367 aa15.02■□□□□ -0
DDX55-203ENST00000421670 LOXL2Q9Y4K0 774 aa15.02■□□□□ -0
DDX55-203ENST00000421670 FER1L5A0AVI2 2057 aa15.02■□□□□ -0
DDX55-203ENST00000421670 A0A1W2PNU3 283 aaPredicted RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 TMEM150CB9EJG8 249 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 H0YGG7 62 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 H0YIV9 168 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 POLR3GO15318 223 aaPredicted RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 P2RX6O15547 441 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 EIF2S1P05198 315 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 SERPIND1P05546 499 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 ENO1P06733 434 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 CCL4P13236 92 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 ITIH1P19827 911 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 SERPINB3P29508 390 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 HMOX2P30519 316 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 MDH1P40925 334 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 HTR6P50406 440 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 ARF3P61204 181 aaPredicted RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 OCRLQ01968 901 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 ZC3H12BQ5HYM0 836 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 RAB11FIP2Q7L804 512 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 DGLUCYQ7Z3D6 616 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 VN1R5Q7Z5H4 357 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 TMPRSS12Q86WS5 348 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 MCATQ8IVS2 390 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 LAS2Q8IYD9 372 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 TBC1D19Q8N5T2 526 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 BMPERQ8N8U9 685 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 MFSD9Q8NBP5 474 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 MTFMTQ96DP5 389 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 RNF31Q96EP0 1072 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 MTERF1Q99551 399 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 CMKLR1Q99788 373 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 SLC29A3Q9BZD2 475 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 APMAPQ9HDC9 416 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 PRM3Q9NNZ6 103 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 FARSBQ9NSD9 589 aaKnown RBP15.02□□□□□ -0.01
DDX55-203ENST00000421670 STARD5Q9NSY2 213 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 PLCL2Q9UPR0 1127 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 PCDHGA11Q9Y5H2 935 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 CEP295Q9C0D2 2601 aa15.02□□□□□ -0.01
DDX55-203ENST00000421670 TMX2-CTNND1H3BSU7 103 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 AZIN1O14977 448 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 NDUFS4O43181 175 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 NEK2P51955 445 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 RELAQ04206 551 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 PUM1Q14671 1186 aaKnown RBP eCLIP15.01□□□□□ -0.015e-7■■■■■ 34.5
DDX55-203ENST00000421670 HKDC1Q2TB90 917 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 SGO1Q5FBB7 561 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 C3orf38Q5JPI3 329 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 KANK2Q63ZY3 851 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 FRG2Q64ET8 278 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 FOXR1Q6PIV2 292 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 FAM47EQ6ZV65 393 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 OR1L3Q8NH93 324 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 HUS1BQ8NHY5 278 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms