RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 ERVPABLB-1P60509 514 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 CPSF6Q16630 551 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00271-201ENST00000421378 MED27Q6P2C8 311 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 SYVN1Q86TM6 617 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 PPP1R3BQ86XI6 285 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 OR4N4Q8N0Y3 316 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 ARFGAP2Q8N6H7 521 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 ANKRD53Q8N9V6 530 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 MFSD9Q8NBP5 474 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 AGAP11Q8TF27 550 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 DYDC1Q8WWB3 177 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 UBE2E3Q969T4 207 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 SYNPO2LQ9H987 977 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 APMAPQ9HDC9 416 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 INTS9Q9NV88 658 aaKnown RBP16.77■□□□□ 0.28
LINC00271-201ENST00000421378 SLC39A1Q9NY26 324 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 SERTAD3Q9UJW9 196 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 ZNF225Q9UK10 706 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 KLK13Q9UKR3 277 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 PCDHGA8Q9Y5G5 932 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 MDC1Q14676 2089 aaKnown RBP16.77■□□□□ 0.28
LINC00271-201ENST00000421378 H0YGG7 62 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 OR2B3O76000 313 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 OR4F21O95013 312 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 EIF2S1P05198 315 aaKnown RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 GSTM2P28161 218 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 AHRP35869 848 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 ETV5P41161 510 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 ATP1A2P50993 1020 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 ITGA1P56199 1179 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 VSX2P58304 361 aaPredicted RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 ARF3P61204 181 aaPredicted RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 GABREP78334 506 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 GALNT1Q10472 559 aaPredicted RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 ARL13AQ5H913 290 aaPredicted RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 TCTE1Q5JU00 501 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 BPHLQ86WA6 291 aaPredicted RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 LAS2Q8IYD9 372 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 GPR135Q8IZ08 494 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 TTLQ8NG68 377 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 OR8K5Q8NH50 307 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 OR1L3Q8NH93 324 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 PRR11Q96HE9 360 aaPredicted RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 CTRCQ99895 268 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 SCNM1Q9BWG6 230 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 NT5DC2Q9H857 520 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 POLR1BQ9H9Y6 1135 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 EML4Q9HC35 981 aaKnown RBP16.77■□□□□ 0.27
LINC00271-201ENST00000421378 TRPS1Q9UHF7 1281 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 ZFP69BQ9UJL9 534 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 WASF3Q9UPY6 502 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 PCDHGA11Q9Y5H2 935 aa16.77■□□□□ 0.27
LINC00271-201ENST00000421378 TMEM114B3SHH9 223 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 H0YIV9 168 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 NDUFS4O43181 175 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 CHRNGP07510 517 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 FGF5P12034 268 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 CYP4F2P78329 520 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 DCAF12Q5T6F0 453 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 VN1R4Q7Z5H5 301 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 ASPGQ86U10 573 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 CUZD1Q86UP6 607 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 TRIM42Q8IWZ5 723 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 ZNF655Q8N720 491 aaPredicted RBP16.76■□□□□ 0.27
LINC00271-201ENST00000421378 CSNK1A1LQ8N752 337 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 CDYL2Q8N8U2 506 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 OR7G3Q8NG95 312 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 RAB3IL1Q8TBN0 382 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 REPS1Q96D71 796 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 SEC16BQ96JE7 1060 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 ZNF285Q96NJ3 590 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 SHCBP1LQ9BZQ2 653 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 PRM3Q9NNZ6 103 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 ZNF490Q9ULM2 529 aaPredicted RBP16.76■□□□□ 0.27
LINC00271-201ENST00000421378 AP1M2Q9Y6Q5 423 aa16.76■□□□□ 0.27
LINC00271-201ENST00000421378 ANKDD1BA6NHY2 528 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 H3BMH7 237 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 FFAR3O14843 346 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 GPR42O15529 346 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 ZSCAN9O15535 394 aaPredicted RBP16.75■□□□□ 0.27
LINC00271-201ENST00000421378 ENO1P06733 434 aaKnown RBP16.75■□□□□ 0.27
LINC00271-201ENST00000421378 CTSBP07858 339 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 ADRB1P08588 477 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 SLC35G6P0C7Q6 338 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 PCNAP12004 261 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 SPINK2P20155 84 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 ARRB2P32121 409 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 CAMK2BQ13554 666 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 ZRSR2Q15696 482 aaKnown RBP16.75■□□□□ 0.27
LINC00271-201ENST00000421378 WASHC2DQ5SRD0 308 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 TMEM164Q5U3C3 297 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 CES4AQ5XG92 561 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 TTC19Q6DKK2 380 aaPredicted RBP16.75■□□□□ 0.27
LINC00271-201ENST00000421378 ADNP2Q6IQ32 1131 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 CEACAM20Q6UY09 585 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 LSMEM2Q8N112 164 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 TRPV3Q8NET8 790 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 SLC13A3Q8WWT9 602 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 PMEPA1Q969W9 287 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms