RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 VAC14Q08AM6 782 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 COL9A2Q14055 689 aaPredicted RBP17.73■□□□□ 0.43
DDR1-233ENST00000421124 MUM1Q2TAK8 710 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 HKDC1Q2TB90 917 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 GARNL3Q5VVW2 1013 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 ATG9BQ674R7 924 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 LCN10Q6JVE6 187 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 C19orf48Q6RUI8 117 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 VN1R4Q7Z5H5 301 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 PTGR2Q8N8N7 351 aaPredicted RBP17.73■□□□□ 0.43
DDR1-233ENST00000421124 CAMKVQ8NCB2 501 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 ZNF740Q8NDX6 193 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 C10orf90Q96M02 699 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 SPNS1Q9H2V7 528 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 DCDC2Q9UHG0 476 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 LGALS13Q9UHV8 139 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 KCND3Q9UK17 655 aa17.73■□□□□ 0.43
DDR1-233ENST00000421124 TNPO3Q9Y5L0 923 aaKnown RBP17.73■□□□□ 0.43
DDR1-233ENST00000421124 KMT2BQ9UMN6 2715 aaPredicted RBP17.72■□□□□ 0.43
DDR1-233ENST00000421124 C9J4A7 227 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 K7ENP7 123 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 GLRA3O75311 464 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 STATHP02808 62 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 EPORP19235 508 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 WT1P19544 449 aaPredicted RBP17.72■□□□□ 0.43
DDR1-233ENST00000421124 F8A1P23610 371 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 VARSP26640 1264 aaKnown RBP17.72■□□□□ 0.43
DDR1-233ENST00000421124 SCTRP47872 440 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 CXADRP78310 365 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 DCDP81605 110 aaKnown RBP17.72■□□□□ 0.43
DDR1-233ENST00000421124 PCBP2Q15366 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDR1-233ENST00000421124 COL28A1Q2UY09 1125 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 NKAIN1Q4KMZ8 207 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 METTL2BQ6P1Q9 378 aaKnown RBP17.72■□□□□ 0.43
DDR1-233ENST00000421124 C16orf46Q6P387 395 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 INO80CQ6PI98 192 aaPredicted RBP17.72■□□□□ 0.43
DDR1-233ENST00000421124 SH2D5Q6ZV89 423 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 ASPGQ86U10 573 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 TMEM151AQ8N4L1 468 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 ZSCAN1Q8NBB4 408 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 TM4SF19Q96DZ7 209 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 PHF21BQ96EK2 531 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 SLC45A3Q96JT2 553 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 C17orf62Q9BQA9 187 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 TMEM109Q9BVC6 243 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 FAM117AQ9C073 453 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 EHD1Q9H4M9 534 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 IL17BQ9UHF5 180 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 ANGPTL3Q9Y5C1 460 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 PCDHGA6Q9Y5G7 932 aa17.72■□□□□ 0.43
DDR1-233ENST00000421124 CCDC151A5D8V7 595 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 LRRC14BA6NHZ5 514 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 STX16-NPEPL1H3BU86 382 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 STX16O14662 325 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 KATNA1O75449 491 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 MED26O95402 600 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 CAPN1P07384 714 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 RAB40ALP0C0E4 278 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 SBK3P0C264 359 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 SLC35G6P0C7Q6 338 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 EPB42P16452 691 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 TAC1P20366 129 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 AHRP35869 848 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 RPS15P62841 145 aaKnown RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 IRF8Q02556 426 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 SLBPQ14493 270 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDR1-233ENST00000421124 RBBP5Q15291 538 aaKnown RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 NDUFA9Q16795 377 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 XKR6Q5GH73 641 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 FAM198BQ6UWH4 519 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 KRT78Q8N1N4 520 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 ARHGEF39Q8N4T4 335 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 SLC13A3Q8WWT9 602 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 WDR34Q96EX3 536 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 PTCD3Q96EY7 689 aaKnown RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 CRELD1Q96HD1 420 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 RUFY1Q96T51 708 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 GPR87Q9BY21 358 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 PITHD1Q9GZP4 211 aaPredicted RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 GEMIN8Q9NWZ8 242 aaKnown RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 IFT80Q9P2H3 777 aaPredicted RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 ZFP69BQ9UJL9 534 aa17.71■□□□□ 0.43
DDR1-233ENST00000421124 FARSAQ9Y285 508 aaKnown RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 MRPS18BQ9Y676 258 aaKnown RBP17.71■□□□□ 0.43
DDR1-233ENST00000421124 ZNF891A8MT65 544 aaPredicted RBP17.7■□□□□ 0.42
DDR1-233ENST00000421124 PRAMEF4O60810 478 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 SIX3O95343 332 aaPredicted RBP17.7■□□□□ 0.42
DDR1-233ENST00000421124 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 PIM1P11309 404 aaPredicted RBP17.7■□□□□ 0.42
DDR1-233ENST00000421124 EEF1DP29692 281 aaKnown RBP17.7■□□□□ 0.42
DDR1-233ENST00000421124 PIK3CGP48736 1102 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 CHIT1Q13231 466 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 DOC2AQ14183 400 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 TBCCQ15814 346 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 ARHGAP40Q5TG30 622 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 PRAMEF9Q5VWM5 478 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 PRMT9Q6P2P2 845 aa17.7■□□□□ 0.42
DDR1-233ENST00000421124 METTL27Q8N6F8 245 aaPredicted RBP17.7■□□□□ 0.42
DDR1-233ENST00000421124 ANKRD53Q8N9V6 530 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms