RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 A0A1W2PRG0 241 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ILVBLA1L0T0 632 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM47DPA6NHR8 397 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 K7EPI3 171 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RNF103O00237 685 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SOCS6O14544 535 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 LDLRAD4O15165 306 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 YKT6O15498 198 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RIPK2O43353 540 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PLRG1O43660 514 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 BUD23O43709 281 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 EDF1O60869 148 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMCC2O75069 709 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 NDUFS7O75251 213 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDH16O75309 829 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF254O75437 659 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 GPC4O75487 556 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RSL1D1O76021 490 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 OR6B1O95007 311 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PGM3O95394 542 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PMS2P2O95744 297 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 GGPS1O95749 300 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 BAG2O95816 211 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SERPING1P05155 500 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TFAP2AP05549 437 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM58BPP0C7Q3 252 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM228BP0C875 321 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 KRT3P12035 628 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SCG2P13521 617 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCDC130P13994 396 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TAC1P20366 129 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CFL1P23528 166 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PRDX6P30041 224 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAN1A1P33908 653 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 HOXD13P35453 343 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 FDFT1P37268 417 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MTIF2P46199 727 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CLK1P49759 484 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 VCPP55072 806 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CASP6P55212 293 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PTENP60484 403 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ACTR3P61158 418 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 S100A12P80511 92 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RIPPLY1Q0D2K3 151 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 STX3Q13277 289 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 OLIG2Q13516 323 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SQLEQ14534 574 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 EFNB3Q15768 340 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MOGQ16653 247 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PDK4Q16654 411 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SHROOM1Q2M3G4 852 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 KLHL38Q2WGJ6 581 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 KCTD21Q4G0X4 260 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TAF1BQ53T94 588 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TCHHL1Q5QJ38 904 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RARS2Q5T160 578 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ATAD3BQ5T9A4 648 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 AGAP7PQ5VUJ5 663 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 HIST2H2BCQ6DN03 193 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 WDR73Q6P4I2 378 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 DCLRE1AQ6PJP8 1040 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 UNQ6126/PRO20091Q6UXV3 157 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC36A4Q6YBV0 504 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 IDO2Q6ZQW0 420 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RFPL4BQ6ZWI9 263 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CYP4V2Q6ZWL3 525 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 DGLUCYQ7Z3D6 616 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 R3HCC1LQ7Z5L2 792 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ADAMTSL2Q86TH1 951 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CLVS1Q8IUQ0 354 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF34Q8IZ26 560 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RASGEF1CQ8N431 466 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SPATA6LQ8N4H0 392 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CHCHD4Q8N4Q1 142 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CPSF7Q8N684 471 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 EXD1Q8NHP7 514 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF420Q8TAQ5 688 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 GSDMBQ8TAX9 411 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 HM13Q8TCT9 377 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MGARPQ8TDB4 240 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 HCAR2Q8TDS4 363 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 U2AF1L4Q8WU68 220 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ANKRD49Q8WVL7 239 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SECTM1Q8WVN6 248 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 C10orf82Q8WW14 230 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RFFLQ8WZ73 363 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TANKQ92844 425 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TAMM41Q96BW9 452 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SCMH1Q96GD3 660 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PAGE5Q96GU1 130 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MS4A14Q96JA4 679 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC41A2Q96JW4 573 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMEM68Q96MH6 324 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF641Q96N77 438 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 IL17FQ96PD4 163 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 NAP1L4Q99733 375 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TSG101Q99816 390 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TUBGCP2Q9BSJ2 902 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 C1orf50Q9BV19 199 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms