RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TAF6P49848 677 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 TIMM50Q3ZCQ8 353 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 SETMARQ53H47 684 aaPredicted RBP14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 C16orf62Q7Z3J2 963 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 C3orf58Q8NDZ4 430 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 DERL2Q9GZP9 239 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 SLC25A51Q9H1U9 297 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 ASAH2Q9NR71 780 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 FAM105AQ9NUU6 356 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 MS4A12Q9NXJ0 267 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 DUSP12Q9UNI6 340 aa14.25□□□□□ -0.13
NCKIPSD-204ENST00000416649 LDB2O43679 373 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 LRATO95237 230 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 POU2F1P14859 743 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 TNNI3P19429 210 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 MRPL19P49406 292 aaKnown RBP14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 HSPA14Q0VDF9 509 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 GPR19Q15760 415 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 PTPRNQ16849 979 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 PM20D1Q6GTS8 502 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 ALKAL1Q6UXT8 129 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 CREB3L2Q70SY1 520 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 ABI3BPQ7Z7G0 1075 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 ZSWIM9Q86XI8 627 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 OR4L1Q8NH43 312 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 EEF1AKMT1Q8WVE0 214 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 PHF21AQ96BD5 680 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 CCM2Q9BSQ5 444 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 PPIL3Q9H2H8 161 aaKnown RBP14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 TEX51A0A1B0GUA7 166 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 MYBPHLA2RUH7 354 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 GABRDO14764 452 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 NIPSNAP2O75323 286 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 NDUFS3O75489 264 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 IL32P24001 234 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 BRCC3P46736 316 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 KCNQ1P51787 676 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 SLC14A1Q13336 389 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 IHHQ14623 411 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 KIAA0040Q15053 153 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 POU4F3Q15319 338 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 FLYWCH1Q4VC44 716 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 SDHAF4Q5VUM1 108 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 KIAA1841Q6NSI8 718 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 MTERF3Q96E29 417 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 LINGO1Q96FE5 620 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 HSH2DQ96JZ2 352 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 SMIM14Q96QK8 99 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 GABARAPL1Q9H0R8 117 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 NLKQ9UBE8 527 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 PADI3Q9ULW8 664 aa14.24□□□□□ -0.13
NCKIPSD-204ENST00000416649 IFRD1O00458 451 aaPredicted RBP14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 CSF3P09919 207 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 CKMT1AP12532 417 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 PGFP49763 221 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 CSNK2BP67870 215 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 CSTF3Q12996 717 aaKnown RBP14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 LAMTOR1Q6IAA8 161 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 TIGD7Q6NT04 549 aaPredicted RBP14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 KRT73Q86Y46 540 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 PHC2Q8IXK0 858 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 KLHDC8BQ8IXV7 354 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 TCTE3Q8IZS6 198 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 HRASLS5Q96KN8 279 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 FCRL2Q96LA5 508 aaPredicted RBP14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 SMOQ99835 787 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 DPH2Q9BQC3 489 aaPredicted RBP14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 KLK4Q9Y5K2 254 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 LCHNA4D1U4 455 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 FAM220BPB1ANY3 271 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 WWP2O00308 870 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 SEPT4O43236 478 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 PAGE1O75459 146 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 C1QBP02746 253 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 GPC1P35052 558 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 CDKN2CP42773 168 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 RORCP51449 518 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 SP3Q02447 781 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 MARC1Q5VT66 337 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 SAXO2Q658L1 398 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 FAM122CQ6P4D5 195 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 RDH10Q8IZV5 341 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 TMEM132CQ8N3T6 1108 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 B3GNT7Q8NFL0 401 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 SH3KBP1Q96B97 665 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 FEVQ99581 238 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 CATSPERBQ9H7T0 1116 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 SLC6A14Q9UN76 642 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 CMAHPQ9Y471 501 aa14.23□□□□□ -0.13
NCKIPSD-204ENST00000416649 MROH6A6NGR9 719 aa14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 PIRO00625 290 aa14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 SERPINI2O75830 405 aa14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 B3GAT3O94766 335 aa14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 CDKN1CP49918 316 aaPredicted RBP14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 DBPQ10586 325 aaPredicted RBP14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 SLC35F1Q5T1Q4 408 aa14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 KCTD13Q8WZ19 329 aa14.22□□□□□ -0.13
NCKIPSD-204ENST00000416649 TSSK3Q96PN8 268 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms