RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 MAFKO60675 156 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 MATN4O95460 622 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF26P17031 533 aaPredicted RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 TEAD4Q15561 434 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ATP6AP1Q15904 470 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 GFOD2Q3B7J2 385 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 SNX20Q7Z614 316 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 LNX2Q8N448 690 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ANKFN1Q8N957 763 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF557Q8N988 423 aaPredicted RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 C1orf216Q8TAB5 229 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 RFKQ969G6 155 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 PYURFQ96I23 114 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 HSH2DQ96JZ2 352 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 MYRFLQ96LU7 910 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 WACQ9BTA9 647 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 OSBPL2Q9H1P3 480 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 MEAF6Q9HAF1 191 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ZIM2Q9NZV7 527 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 CHD4Q14839 1912 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 XKRYO14609 159 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 CXCL14O95715 111 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 BMP2P12643 396 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 ANXA8P13928 327 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 FOSL2P15408 326 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 OGNP20774 298 aaKnown RBP12.52□□□□□ -0.4
SCN1B-202ENST00000415950 SLC6A4P31645 630 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 PTGS2P35354 604 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 ABRAXAS2Q15018 415 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 CYS1Q717R9 158 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 OR4C6Q8NH72 309 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 TMEM40Q8WWA1 233 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 OR8D1Q8WZ84 308 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 RPL3LQ92901 407 aaKnown RBP12.52□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF641Q96N77 438 aaPredicted RBP12.52□□□□□ -0.4
SCN1B-202ENST00000415950 SLC30A3Q99726 388 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 MAGEH1Q9H213 219 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 NEK6Q9HC98 313 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 BRD7Q9NPI1 651 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 CKLFQ9UBR5 152 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 MLXQ9UH92 298 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 A0A1W2PRB8 838 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 LCHNA4D1U4 455 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 STSP08842 583 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 ITIH1P19827 911 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 MATN1P21941 496 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 TMBIM6P55061 237 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 DNAJB13P59910 316 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 ADAM8P78325 824 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 ZXDBP98169 803 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 FAM214AQ32MH5 1076 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 CES4AQ5XG92 561 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 FBXO42Q6P3S6 717 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 TMEM126BQ8IUX1 230 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 Q8N9G6 341 aaPredicted RBP12.52□□□□□ -0.4
SCN1B-202ENST00000415950 TRIM43Q96BQ3 446 aaPredicted RBP12.52□□□□□ -0.4
SCN1B-202ENST00000415950 LMLNQ96KR4 655 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 RANBP9Q96S59 729 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 SLC22A4Q9H015 551 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 MAN2B2Q9Y2E5 1009 aa12.52□□□□□ -0.4
SCN1B-202ENST00000415950 NUP188Q5SRE5 1749 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 LRP6O75581 1613 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 OR14I1A6ND48 311 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ZSCAN5BA6NJL1 495 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 WWP2O00308 870 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 SLC1A7O00341 560 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 PCDH7O60245 1069 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 LRP8Q14114 963 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF234Q14588 700 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 HEPACAMQ14CZ8 416 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 SMN1Q16637 294 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 PTCHD3Q3KNS1 767 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 NHSL2Q5HYW2 709 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 PSAPL1Q6NUJ1 521 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF517Q6ZMY9 492 aaPredicted RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 NDNFQ8TB73 568 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 TRUB1Q8WWH5 349 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 IRGQQ8WZA9 623 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 KLK6Q92876 244 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 TMEM246Q9BRR3 403 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 YTHDF1Q9BYJ9 559 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 MRPS33Q9Y291 106 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 F5P12259 2224 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ANKRD66B4E2M5 251 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 HAS3O00219 553 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 PIRO00625 290 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 CDRT1O95170 752 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 RASGRP1O95267 797 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ELNP15502 786 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ALAS2P22557 587 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 MYF6P23409 242 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 AHCYP23526 432 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 DNAJA1P31689 397 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 CTNNB1P35222 781 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms