RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 RHOJQ9H4E5 214 aa19.11■□□□□ 0.65
CTTN-205ENST00000415461 ZNF160Q9HCG1 818 aa19.11■□□□□ 0.65
CTTN-205ENST00000415461 MKKSQ9NPJ1 570 aaPredicted RBP19.11■□□□□ 0.65
CTTN-205ENST00000415461 HEATR5BQ9P2D3 2071 aa19.11■□□□□ 0.65
CTTN-205ENST00000415461 PCM1Q15154 2024 aa19.11■□□□□ 0.65
CTTN-205ENST00000415461 ANKRD12Q6UB98 2062 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 PRRC2CQ9Y520 2896 aaKnown RBP19.1■□□□□ 0.65
CTTN-205ENST00000415461 LCMT2O60294 686 aaKnown RBP19.1■□□□□ 0.65
CTTN-205ENST00000415461 KLHL41O60662 606 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 HPP00738 406 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 SSTR1P30872 391 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 EFNA3P52797 238 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 EMP2P54851 167 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 EEF1A2Q05639 463 aaKnown RBP19.1■□□□□ 0.65
CTTN-205ENST00000415461 PLEKHN1Q494U1 663 aaPredicted RBP19.1■□□□□ 0.65
CTTN-205ENST00000415461 ATG9BQ674R7 924 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 TMEM214Q6NUQ4 689 aaKnown RBP19.1■□□□□ 0.65
CTTN-205ENST00000415461 MAATS1Q7Z4T9 603 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 CEP97Q8IW35 865 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 SHISA5Q8N114 240 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 ZCCHC10Q8TBK6 192 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 TM9SF4Q92544 642 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 THAP11Q96EK4 314 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 PDLIM5Q96HC4 596 aaKnown RBP19.1■□□□□ 0.65
CTTN-205ENST00000415461 THOC3Q96J01 351 aaKnown RBP19.1■□□□□ 0.65
CTTN-205ENST00000415461 VPS39Q96JC1 886 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 VPS50Q96JG6 964 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 MCMBPQ9BTE3 642 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 NSMCE4AQ9NXX6 385 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 B3GNT3Q9Y2A9 372 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 PTPN13Q12923 2485 aa19.1■□□□□ 0.65
CTTN-205ENST00000415461 CXorf49A8MYA2 514 aaPredicted RBP19.09■□□□□ 0.65
CTTN-205ENST00000415461 VPS4BO75351 444 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 HEXBP07686 556 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 COX6A1P12074 109 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 IL1RNP18510 177 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 GRK3P35626 688 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 AVPR1BP47901 424 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 CCR8P51685 355 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 IRAK1BP1Q5VVH5 260 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 ASPGQ86U10 573 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 NKAPQ8N5F7 415 aaKnown RBP19.09■□□□□ 0.65
CTTN-205ENST00000415461 KCT2Q8NC54 265 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 ABHD11Q8NFV4 315 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 ANKRD49Q8WVL7 239 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 ATL1Q8WXF7 558 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 TM4SF19Q96DZ7 209 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 TSNARE1Q96NA8 513 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 TGIF2Q9GZN2 237 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 LHPPQ9H008 270 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 ILKAPQ9H0C8 392 aaPredicted RBP19.09■□□□□ 0.65
CTTN-205ENST00000415461 HCN3Q9P1Z3 774 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 MAP10Q9P2G4 905 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 VPS4AQ9UN37 437 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 NOVA2Q9UNW9 492 aaKnown RBP19.09■□□□□ 0.65
CTTN-205ENST00000415461 CSAG2Q9Y5P2 127 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 NUP210LQ5VU65 1888 aa19.09■□□□□ 0.65
CTTN-205ENST00000415461 CLEC18AA5D8T8 446 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 EIF3HO15372 352 aaKnown RBP eCLIP19.08■□□□□ 0.64
CTTN-205ENST00000415461 JRKO75564 520 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 NSA2O95478 260 aaKnown RBP19.08■□□□□ 0.64
CTTN-205ENST00000415461 GNLYP22749 145 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 SRSF1Q07955 248 aaKnown RBP eCLIP19.08■□□□□ 0.643e-6■■■□□ 18.9
CTTN-205ENST00000415461 CATSPEREQ5SY80 951 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 AGAP7PQ5VUJ5 663 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 CLEC18BQ6UXF7 455 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 ZADH2Q8N4Q0 377 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 MFSD9Q8NBP5 474 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 CAMKVQ8NCB2 501 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 CLEC18CQ8NCF0 446 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 SLC13A3Q8WWT9 602 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 AGAP4Q96P64 663 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 SPNS1Q9H2V7 528 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 GPAMQ9HCL2 828 aa19.08■□□□□ 0.64
CTTN-205ENST00000415461 MDC1Q14676 2089 aaKnown RBP19.07■□□□□ 0.64
CTTN-205ENST00000415461 NSG1A0A0A6YYJ2 146 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 TCRBV9S1A1TA0A576 114 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 H0YIG0 161 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 SGK494L7N484 410 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 NDUFS4O43181 175 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 BMP10O95393 424 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 UBAP2LQ14157 1087 aaKnown RBP19.07■□□□□ 0.64
CTTN-205ENST00000415461 TRADDQ15628 312 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 TSNQ15631 228 aaKnown RBP19.07■□□□□ 0.64
CTTN-205ENST00000415461 Q6ZS92 163 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 PDSS2Q86YH6 399 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 GALNT11Q8NCW6 608 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 ZNF740Q8NDX6 193 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 OR4K1Q8NGD4 311 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 SLC5A11Q8WWX8 675 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 NEIL2Q969S2 332 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 MOCOSQ96EN8 888 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 C19orf60Q96EN9 201 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 UNKQ9C0B0 810 aaKnown RBP19.07■□□□□ 0.64
CTTN-205ENST00000415461 CAB39LQ9H9S4 337 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 MKL2Q9ULH7 1088 aa19.07■□□□□ 0.64
CTTN-205ENST00000415461 MTO1Q9Y2Z2 717 aaKnown RBP19.07■□□□□ 0.64
CTTN-205ENST00000415461 UTP11Q9Y3A2 253 aaKnown RBP19.07■□□□□ 0.64
CTTN-205ENST00000415461 IGHV1-45A0A0A0MS14 117 aa19.06■□□□□ 0.64
CTTN-205ENST00000415461 A0A1W2PQ72 361 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms