RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PITHD1Q9GZP4 211 aaPredicted RBP14.02□□□□□ -0.17
CHD1-202ENST00000414220 PPCSQ9HAB8 311 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 ZNF282Q9UDV7 671 aaPredicted RBP14.02□□□□□ -0.17
CHD1-202ENST00000414220 FETUBQ9UGM5 382 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 TMCO1Q9UM00 188 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 ANGPTL3Q9Y5C1 460 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 PCM1Q15154 2024 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 FEZF1A0PJY2 475 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 ZZEF1O43149 2961 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 NRP2O60462 931 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 CCNT2O60583 730 aaKnown RBP14.01□□□□□ -0.17
CHD1-202ENST00000414220 KLHL41O60662 606 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 ALDOAP04075 364 aaKnown RBP14.01□□□□□ -0.17
CHD1-202ENST00000414220 SERPIND1P05546 499 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 CAPN1P07384 714 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 C1GALT1C1LP0DN25 315 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 GFAPP14136 432 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 GSTM2P28161 218 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 AHRP35869 848 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 SLC6A12P48065 614 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 HSPA7P48741 367 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 LAPTM5Q13571 262 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 PWP1Q13610 501 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 SLC29A2Q14542 456 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 RBBP5Q15291 538 aaKnown RBP14.01□□□□□ -0.17
CHD1-202ENST00000414220 PDK4Q16654 411 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 PAGE2BQ5JRK9 111 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 CATSPEREQ5SY80 951 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 MRPL14Q6P1L8 145 aaKnown RBP14.01□□□□□ -0.17
CHD1-202ENST00000414220 LRRC70Q7Z2Q7 622 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 LRRN4CLQ8ND94 238 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 MIEF2Q96C03 454 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 MMABQ96EY8 250 aaPredicted RBP14.01□□□□□ -0.17
CHD1-202ENST00000414220 SCYL1Q96KG9 808 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 FER1L6-AS2Q96M78 137 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 CD244Q9BZW8 370 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 SLC26A1Q9H2B4 701 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 ANKHQ9HCJ1 492 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 ACSS2Q9NR19 701 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 IGSF5Q9NSI5 407 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 ZFP69BQ9UJL9 534 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 TUBD1Q9UJT1 453 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 PTBP2Q9UKA9 531 aaKnown RBP14.01□□□□□ -0.17
CHD1-202ENST00000414220 TNPO3Q9Y5L0 923 aaKnown RBP14.01□□□□□ -0.17
CHD1-202ENST00000414220 MAU2Q9Y6X3 613 aa14.01□□□□□ -0.17
CHD1-202ENST00000414220 HMX2A2RU54 273 aa14□□□□□ -0.17
CHD1-202ENST00000414220 TRIM49D1C9J1S8 452 aa14□□□□□ -0.17
CHD1-202ENST00000414220 H0YIG0 161 aa14□□□□□ -0.17
CHD1-202ENST00000414220 FAM153BP0C7A2 387 aa14□□□□□ -0.17
CHD1-202ENST00000414220 OTX2P32243 289 aa14□□□□□ -0.17
CHD1-202ENST00000414220 BCL6P41182 706 aa14□□□□□ -0.17
CHD1-202ENST00000414220 GDF5P43026 501 aa14□□□□□ -0.17
CHD1-202ENST00000414220 GLRBP48167 497 aa14□□□□□ -0.17
CHD1-202ENST00000414220 POLE2P56282 527 aa14□□□□□ -0.17
CHD1-202ENST00000414220 DSG2Q14126 1118 aa14□□□□□ -0.17
CHD1-202ENST00000414220 HERC3Q15034 1050 aa14□□□□□ -0.17
CHD1-202ENST00000414220 ZXDCQ2QGD7 858 aaPredicted RBP14□□□□□ -0.17
CHD1-202ENST00000414220 FAM153CQ494X1 144 aa14□□□□□ -0.17
CHD1-202ENST00000414220 SOWAHCQ53LP3 525 aaPredicted RBP14□□□□□ -0.17
CHD1-202ENST00000414220 ATG9BQ674R7 924 aa14□□□□□ -0.17
CHD1-202ENST00000414220 ADGRD1Q6QNK2 874 aa14□□□□□ -0.17
CHD1-202ENST00000414220 MED25Q71SY5 747 aa14□□□□□ -0.17
CHD1-202ENST00000414220 ABHD13Q7L211 337 aa14□□□□□ -0.17
CHD1-202ENST00000414220 METTL27Q8N6F8 245 aaPredicted RBP14□□□□□ -0.17
CHD1-202ENST00000414220 TMEM102Q8N9M5 508 aaPredicted RBP14□□□□□ -0.17
CHD1-202ENST00000414220 DCAKDQ8WVC6 231 aa14□□□□□ -0.17
CHD1-202ENST00000414220 UBE2E3Q969T4 207 aa14□□□□□ -0.17
CHD1-202ENST00000414220 ISL2Q96A47 359 aa14□□□□□ -0.17
CHD1-202ENST00000414220 TM4SF19Q96DZ7 209 aa14□□□□□ -0.17
CHD1-202ENST00000414220 SEC16BQ96JE7 1060 aa14□□□□□ -0.17
CHD1-202ENST00000414220 ATOH8Q96SQ7 321 aa14□□□□□ -0.17
CHD1-202ENST00000414220 EHD1Q9H4M9 534 aa14□□□□□ -0.17
CHD1-202ENST00000414220 MKKSQ9NPJ1 570 aaPredicted RBP14□□□□□ -0.17
CHD1-202ENST00000414220 GEMIN8Q9NWZ8 242 aaKnown RBP14□□□□□ -0.17
CHD1-202ENST00000414220 PSMC3IPQ9P2W1 217 aaPredicted RBP14□□□□□ -0.17
CHD1-202ENST00000414220 OPTCQ9UBM4 332 aa14□□□□□ -0.17
CHD1-202ENST00000414220 SH2B3Q9UQQ2 575 aa14□□□□□ -0.17
CHD1-202ENST00000414220 DSPP15924 2871 aaKnown RBP14□□□□□ -0.17
CHD1-202ENST00000414220 ANKDD1BA6NHY2 528 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 MKRN2OSH3BPM6 223 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 UBXN8O00124 270 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 TAPBPO15533 448 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 NDUFS4O43181 175 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 LCMT2O60294 686 aaKnown RBP13.99□□□□□ -0.17
CHD1-202ENST00000414220 SMIM24O75264 130 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 RFPL1O75677 317 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 KLF7O75840 302 aaPredicted RBP13.99□□□□□ -0.17
CHD1-202ENST00000414220 NSA2O95478 260 aaKnown RBP13.99□□□□□ -0.17
CHD1-202ENST00000414220 EPB42P16452 691 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 SCTRP47872 440 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 PIK3CGP48736 1102 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 REEP5Q00765 189 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 IRF9Q00978 393 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 MEF2AQ02078 507 aaPredicted RBP13.99□□□□□ -0.17
CHD1-202ENST00000414220 IRF8Q02556 426 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 DLG1Q12959 904 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 KCNAB2Q13303 367 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 NKG7Q16617 165 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 LINC00303Q3SY05 128 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 XKR6Q5GH73 641 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms