RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TIMM13Q9Y5L4 95 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TNFRSF18Q9Y5U5 241 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SOGA1O94964 1423 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 KIF15Q9NS87 1388 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 MAST3O60307 1309 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PDS5AQ29RF7 1337 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 MYBBP1AQ9BQG0 1328 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CNTNAP2Q9UHC6 1331 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 A0A0A6YYC8 382 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 TEX13CA0A0J9YWL9 993 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PLSCR5A0PG75 271 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 LINC00587B1AMM8 73 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 H3BQ06 376 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 H7C1D1 291 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 I3L1I5 382 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 TOR1AO14656 332 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 WNT9AO14904 365 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 ANKRD28O15084 1053 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 ADAMDEC1O15204 470 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PFDN6O15212 129 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CLIC2O15247 247 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PJA2O43164 708 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SPRY1O43609 319 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CCNT2O60583 730 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 MSCO60682 206 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 NDUFS3O75489 264 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CSDE1O75534 798 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PRPF6O94906 941 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 NXPH2O95156 264 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 ZBTB11O95625 1053 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CXCL14O95715 111 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 GLP2RO95838 553 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SLC16A8O95907 504 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PIGRP01833 764 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CXCL10P02778 98 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CRHP06850 196 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 ANXA4P09525 319 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM191BP0C7N4 346 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SAGP10523 405 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 ENO3P13929 434 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CD36P16671 472 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 GABRB1P18505 474 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 MAGP20916 626 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 DGKAP23743 735 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 DTYMKP23919 212 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 EEF1B2P24534 225 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 OR1E1P30953 314 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CXCR5P32302 372 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CDKN1AP38936 164 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 P2RY2P41231 377 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SLC1A2P43004 574 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 MAGEA2P43356 314 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 MAGEB1P43366 347 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 NAMPTP43490 491 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 KCNJ1P48048 391 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CXCR3P49682 368 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SERPINH1P50454 418 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 AP2S1P53680 142 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RAD23BP54727 409 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PKNOX1P55347 436 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RAB11AP62491 216 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 VSNL1P62760 191 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RPS15P62841 145 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RPL11P62913 178 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 TNNC1P63316 161 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 HPCAP84074 193 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 MXRA7P84157 204 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CSTF1Q05048 431 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 BST1Q10588 318 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 KLF10Q13118 480 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 BFSP2Q13515 415 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 STXBP2Q15833 593 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RAB11BQ15907 218 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SMN1Q16637 294 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CA9Q16790 459 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PHKG1Q16816 387 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 C5orf64Q2M2E5 130 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM35AQ53FP2 167 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 FAM47AQ5JRC9 791 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 C9orf50Q5SZB4 431 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CELF3Q5SZQ8 465 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SEL1L2Q5TEA6 688 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 LIPMQ5VYY2 423 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 FAM160B1Q5W0V3 765 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 HMBOX1Q6NT76 420 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 FIGLAQ6QHK4 219 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 METTL7BQ6UX53 244 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 Q6ZNX1 250 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SLC16A12Q6ZSM3 486 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 PAQR9Q6ZVX9 377 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 USP43Q70EL4 1123 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RNF44Q7L0R7 432 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 EIF3MQ7L2H7 374 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 SMIM15Q7Z3B0 74 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RD3Q7Z3Z2 195 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 P4HA3Q7Z4N8 544 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 ABHD12BQ7Z5M8 362 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 TMC8Q8IU68 726 aa3.5□□□□□ -1.85
SF3B1-203ENST00000414174 RBM45Q8IUH3 476 aaKnown RBP3.5□□□□□ -1.85
SF3B1-203ENST00000414174 CROCCP3Q8IVE0 287 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms