RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CARD6Q9BX69 1037 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 VN1R1Q9GZP7 353 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 CXXC4Q9H2H0 198 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 LRRC40Q9H9A6 602 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 ANKRD10Q9NXR5 420 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 RUVBL2Q9Y230 463 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 R3HDM2Q9Y2K5 976 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 ASB1Q9Y576 335 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 NFS1Q9Y697 457 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 PHF3Q92576 2039 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 JMJD1CQ15652 2540 aa9.02□□□□□ -0.96
RFFL-203ENST00000413582 A0A0A6YYC8 382 aaPredicted RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 IGKV1-8A0A0C4DH67 115 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 F8W8V4 182 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 I3L1I5 382 aaPredicted RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 PHF2O75151 1096 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 VPS26AO75436 327 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 FAM155BO75949 473 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 METTL18O95568 372 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 TUBBP07437 444 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 ANXA5P08758 320 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 CD96P40200 585 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 FNTAP49354 379 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 IST1P53990 364 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 SNRPNP63162 240 aaKnown RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 FASTKQ14296 549 aaKnown RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 SEMA3AQ14563 771 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 NAA25Q14CX7 972 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 TMED2Q15363 201 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 SIX1Q15475 284 aaPredicted RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 CCDC38Q502W7 563 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 RNFT1Q5M7Z0 435 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 SPINK14Q6IE38 97 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 LRRC8BQ6P9F7 803 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 DARS2Q6PI48 645 aaKnown RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 ZNF534Q76KX8 674 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 GALNTL5Q7Z4T8 443 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 CPEB2Q7Z5Q1 589 aaKnown RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 TMEM200AQ86VY9 491 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 PAQR7Q86WK9 346 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 TGIF2LYQ8IUE0 185 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 CRLF3Q8IUI8 442 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 EID3Q8N140 333 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 MARVELD2Q8N4S9 558 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 TMEM178AQ8NBL3 297 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 FOXC2Q99958 501 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 UTP23Q9BRU9 249 aaKnown RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 ACAT2Q9BWD1 397 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 TSSK1BQ9BXA7 367 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 DRC3Q9H069 523 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 COQ3Q9NZJ6 369 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 SPATA7Q9P0W8 599 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 SLC2A6Q9UGQ3 507 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 DRG1Q9Y295 367 aaKnown RBP9.02□□□□□ -0.97
RFFL-203ENST00000413582 SCN3AQ9NY46 2000 aa9.02□□□□□ -0.97
RFFL-203ENST00000413582 FAM90A27PA6NNH2 459 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 GABRR3A8MPY1 467 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 FOXO6A8MYZ6 492 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 PRRG2O14669 202 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 P2RX6O15547 441 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 NEURL1O76050 574 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 CYC1P08574 325 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 ERGP11308 486 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 DRD2P14416 443 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 CD46P15529 392 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 ZNF24P17028 368 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 MSX1P28360 303 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 CMPK1P30085 196 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 PTGER1P34995 402 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 MEP1AQ16819 746 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 PARP6Q2NL67 630 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 ZNF425Q6IV72 752 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 TTC23LQ6PF05 361 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.01□□□□□ -0.97
RFFL-203ENST00000413582 DMRTC2Q8IXT2 367 aaPredicted RBP9.01□□□□□ -0.97
RFFL-203ENST00000413582 SHISA5Q8N114 240 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 RAB42Q8N4Z0 105 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 PRELID2Q8N945 189 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 DNAAF3Q8N9W5 541 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 FAM98AQ8NCA5 519 aaKnown RBP9.01□□□□□ -0.97
RFFL-203ENST00000413582 MYRIPQ8NFW9 859 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 SLC35B2Q8TB61 432 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 GRK7Q8WTQ7 553 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 METTL21AQ8WXB1 218 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 ATG4AQ8WYN0 398 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 SLCO2A1Q92959 643 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 HDAC10Q969S8 669 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 OR2A5Q96R48 311 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 TTC1Q99614 292 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 KCNK13Q9HB14 408 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 C19orf25Q9UFG5 118 aaPredicted RBP9.01□□□□□ -0.97
RFFL-203ENST00000413582 PCYOX1Q9UHG3 505 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 GNPTGQ9UJJ9 305 aa9.01□□□□□ -0.97
RFFL-203ENST00000413582 FN1P02751 2386 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 NKX2-6A6NCS4 301 aa9□□□□□ -0.97
RFFL-203ENST00000413582 PRMT5O14744 637 aaPredicted RBP9□□□□□ -0.97
RFFL-203ENST00000413582 CTIFO43310 598 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 NME2P1O60361 137 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms