RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 LSMEM2Q8N112 164 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ZNF655Q8N720 491 aaPredicted RBP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 MFSD9Q8NBP5 474 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 OR8K5Q8NH50 307 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ZNF285Q96NJ3 590 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ACBD3Q9H3P7 528 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ZNF490Q9ULM2 529 aaPredicted RBP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 KCNE1BA0A087WTH5 132 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 WDR91A4D1P6 747 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 NVLO15381 856 aaKnown RBP29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 P2RX6O15547 441 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 SCRG1O75711 98 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 DXOO77932 396 aaKnown RBP29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 NTRK1P04629 796 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 BPGMP07738 259 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 SERPINB4P48594 390 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 CCNG1P51959 295 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 PCDH1Q08174 1060 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 E2F2Q14209 437 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 HKDC1Q2TB90 917 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 BPHLQ86WA6 291 aaPredicted RBP29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 GPR135Q8IZ08 494 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 MDM1Q8TC05 714 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 RERGQ96A58 199 aaPredicted RBP29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 SARGQ9BW04 601 aa29.22■■■□□ 2.27
CSNK1E-206ENST00000413574 TRIM13O60858 407 aa29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 HPDP32754 393 aaPredicted RBP29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 SCTRP47872 440 aa29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 TRAF3Q13114 568 aa29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 TMIGD1Q6UXZ0 262 aa29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 MGARPQ8TDB4 240 aa29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 GATA6Q92908 595 aa29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 EFCAB11Q9BUY7 163 aa29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 GATA5Q9BWX5 397 aaPredicted RBP29.21■■■□□ 2.27
CSNK1E-206ENST00000413574 ZSCAN9O15535 394 aaPredicted RBP29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 ZNF749O43361 778 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 DHRS4L1P0CG22 281 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 CYP4F2P78329 520 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 ZCCHC23Q6ZST2 131 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 KRT78Q8N1N4 520 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 CSNK1A1LQ8N752 337 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 SLC38A9Q8NBW4 561 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 OR4F6Q8NGB9 312 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 TEFMQ96QE5 360 aaKnown RBP29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 NTMT1Q9BV86 223 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 ULBP3Q9BZM4 244 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 ZNF225Q9UK10 706 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 PCDHGA7Q9Y5G6 932 aa29.2■■■□□ 2.27
CSNK1E-206ENST00000413574 TEX51A0A1B0GUA7 166 aa29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 HMGB1P1B2RPK0 211 aaPredicted RBP29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 KIAA0754O94854 1291 aa29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 CXCR2P25025 360 aa29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 TCTE1Q5JU00 501 aa29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 CFAP157Q5JU67 520 aa29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 PAIP2Q9BPZ3 127 aaKnown RBP29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 ZPBPQ9BS86 351 aa29.2■■■□□ 2.26
CSNK1E-206ENST00000413574 CLDN9O95484 217 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 SERPIND1P05546 499 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 WDR4P57081 412 aaKnown RBP29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 ERVPABLB-1P60509 514 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 CPSF6Q16630 551 aaKnown RBP eCLIP29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 PAGE2BQ5JRK9 111 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 LIPJQ5W064 366 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 GRHL2Q6ISB3 625 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 ASPGQ86U10 573 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 ZFAND4Q86XD8 727 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 NUDCD3Q8IVD9 361 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 TBC1D19Q8N5T2 526 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 L3MBTL4Q8NA19 623 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 SLC13A3Q8WWT9 602 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 TM4SF19Q96DZ7 209 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 THAP11Q96EK4 314 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 TMEM121BQ9BXQ6 578 aaPredicted RBP29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 ZFP69BQ9UJL9 534 aa29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 RUVBL1Q9Y265 456 aaKnown RBP29.19■■■□□ 2.26
CSNK1E-206ENST00000413574 UBFD1O14562 309 aaKnown RBP29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 DYNC1I1O14576 645 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 STK17BO94768 372 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 SNRPNP63162 240 aaKnown RBP29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 LAPTM5Q13571 262 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 PRTGQ2VWP7 1150 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 LETMD1Q6P1Q0 360 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 FRMD7Q6ZUT3 714 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 MILR1Q7Z6M3 343 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 ACTR5Q9H9F9 607 aaPredicted RBP29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 THSD1Q9NS62 852 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 AP1M2Q9Y6Q5 423 aa29.18■■■□□ 2.26
CSNK1E-206ENST00000413574 FER1L5A0AVI2 2057 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 NDUFS4O43181 175 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 MED26O95402 600 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 OTCP00480 354 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 AHRP35869 848 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 LCP2Q13094 533 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 HIST2H2ACQ16777 129 aaPredicted RBP29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 HIST2H2AA3Q6FI13 130 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 TLDC1Q6P9B6 456 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 VN1R5Q7Z5H4 357 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 SYVN1Q86TM6 617 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 DTWD1Q8N5C7 304 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms