RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 C19orf48Q6RUI8 117 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 RTN4RL1Q86UN2 441 aaPredicted RBP17.04■□□□□ 0.32
SDCBP-202ENST00000413219 SNX18Q96RF0 628 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 FEVQ99581 238 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 TTPALQ9BTX7 342 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 SLC12A9Q9BXP2 914 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 TPT1P8Q9HAU6 139 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 TMEM98Q9Y2Y6 226 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 GRIP1Q9Y3R0 1128 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF106Q9H2Y7 1883 aaKnown RBP17.04■□□□□ 0.32
SDCBP-202ENST00000413219 A0A075B6Q4 140 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 AGAP14A8MT82 685 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 NBNO60934 754 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 C8GP07360 202 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 STSP08842 583 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 COL6A1P12109 1028 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 COX7A2P14406 83 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 BPIP17213 487 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 SPAM1P38567 509 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 NSG1P42857 185 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 COPZ1P61923 177 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 NKX3-2P78367 333 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 FAM189BP81408 668 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 CHRNA6Q15825 494 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 CDKN3Q16667 212 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 TRIM71Q2Q1W2 868 aaKnown RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 HECTD3Q5T447 861 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 ATXN7L2Q5T6C5 722 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 Q6ZPB1 254 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 SETD6Q8TBK2 473 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 CENPOQ9BU64 300 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 CCDC177Q9NQR7 707 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF226Q9NYT6 803 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF221Q9UK13 617 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 NOX1Q9Y5S8 564 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 CPSF4O95639 269 aaKnown RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 PTHP01270 115 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 ATF6P18850 670 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 AOAHP28039 575 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 CRYBA2P53672 197 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 FKBP1BP68106 108 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 TEAD4Q15561 434 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 C6orf183Q5T699 404 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 UBE2R2Q712K3 238 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 ADGRG2Q8IZP9 1017 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 FLCNQ8NFG4 579 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 OR10G2Q8NGC3 310 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 LILRB4Q8NHJ6 448 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 TP53INP1Q96A56 240 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 GPR83Q9NYM4 423 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 CRNNQ9UBG3 495 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 BTNL2Q9UIR0 455 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 MAPRE3Q9UPY8 281 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 FCF1Q9Y324 198 aaKnown RBP17.03■□□□□ 0.32
SDCBP-202ENST00000413219 FRMPD3Q5JV73 1810 aa17.03■□□□□ 0.32
SDCBP-202ENST00000413219 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 TMEM229AB2RXF0 380 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 COCHO43405 550 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 IDH3BO43837 385 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 JUPP14923 745 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 TIE1P35590 1138 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 ST3GAL4Q11206 333 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 ZXDCQ2QGD7 858 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 RSPO2Q6UXX9 243 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 TSEN54Q7Z6J9 526 aaKnown RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 SLC5A8Q8N695 610 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 CELF2-AS1Q8N7Q2 184 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 Q8N9G6 341 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 GALNT6Q8NCL4 622 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 OR4C15Q8NGM1 316 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 OR6F1Q8NGZ6 308 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 METTL2AQ96IZ6 378 aaKnown RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 Q96MT0 163 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 CHCHD6Q9BRQ6 235 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 CDCA4Q9BXL8 241 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 GPR62Q9BZJ7 368 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 AMBNQ9NP70 447 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 DNAJC11Q9NVH1 559 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 NDUFAF4Q9P032 175 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 FZD4Q9ULV1 537 aa17.02■□□□□ 0.32
SDCBP-202ENST00000413219 RUVBL1Q9Y265 456 aaKnown RBP17.02■□□□□ 0.32
SDCBP-202ENST00000413219 PDZK1P1A8MUH7 402 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 CENPBD1B2RD01 187 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 MAGP20916 626 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 SLC15A1P46059 708 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 OR2B6P58173 313 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 CLPPQ16740 277 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 PTCHD3Q3KNS1 767 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 UBQLNLQ8IYU4 475 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 CLECL1Q8IZS7 167 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 NLGN4XQ8N0W4 816 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 TMCO6Q96DC7 493 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 SDHCQ99643 169 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 MIR1-1HGQ9H1L0 117 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 RNF167Q9H6Y7 350 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms