RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 CCDC74BQ96LY2 380 aa24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 MAGEB10Q96LZ2 347 aaPredicted RBP24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 MACROD1Q9BQ69 325 aa24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 EPN3Q9H201 632 aa24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 ELOVL6Q9H5J4 265 aa24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 NT5DC2Q9H857 520 aa24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 SNX6Q9UNH7 406 aa24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 USH1CQ9Y6N9 552 aa24.84■■□□□ 1.57
RHBDD3-203ENST00000413137 CFAP54Q96N23 3096 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 CEP250Q9BV73 2442 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 LOC105369274A0A096LPK9 316 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 LOC102723532A0A0G2JNH3 316 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 ULK1O75385 1050 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 RFPL3O75679 317 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 TBX6O95947 436 aaPredicted RBP24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 THRAP10827 490 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 EZRP15311 586 aaKnown RBP24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 CXCR2P25025 360 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 PDX1P52945 283 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 CBX1P83916 185 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 COL9A2Q14055 689 aaPredicted RBP24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 SPIDRQ14159 915 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 TUBB8Q3ZCM7 444 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 GLRX5Q86SX6 157 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 OR4N4Q8N0Y3 316 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 NETO1Q8TDF5 533 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 SELENOMQ8WWX9 145 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 KLHL6Q8WZ60 621 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 OR2A5Q96R48 311 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 SARGQ9BW04 601 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 PCDHGA4Q9Y5G9 962 aa24.83■■□□□ 1.57
RHBDD3-203ENST00000413137 SPAARA0A1B0GVQ0 90 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 MAGEB17A8MXT2 336 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 HDAC3O15379 428 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 SH3BGRLO75368 114 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 ZBTB11O95625 1053 aaPredicted RBP24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 KRT6AP02538 564 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 KRT6BP04259 564 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 GRK3P35626 688 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 KRT6CP48668 564 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 RNF44Q7L0R7 432 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 ARHGAP22Q7Z5H3 698 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 VN1R4Q7Z5H5 301 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 DDIASQ8IXT1 998 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 DNAJC22Q8N4W6 341 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 MFSD9Q8NBP5 474 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 TCTN2Q96GX1 697 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 SLC41A2Q96JW4 573 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 RHBGQ9H310 441 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 KCNK13Q9HB14 408 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 SOHLH2Q9NX45 425 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 DCTN4Q9UJW0 460 aa24.82■■□□□ 1.56
RHBDD3-203ENST00000413137 HGSO14964 777 aaPredicted RBP24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 TGDSO95455 350 aa24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 ETHE1O95571 254 aa24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 GABRA4P48169 554 aa24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 INSM1Q01101 510 aaPredicted RBP24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 IFT88Q13099 833 aa24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 OR2T11Q8NH01 316 aa24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 CREB3L4Q8TEY5 395 aa24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 ZNF473Q8WTR7 871 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 ZFYVE21Q9BQ24 234 aa24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 ZNF768Q9H5H4 540 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-203ENST00000413137 AQP5P55064 265 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 RPS15AP62244 130 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 HSD11B2P80365 405 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 HMGCS1Q01581 520 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 ZFP36L1Q07352 338 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 ILKQ13418 452 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 NAA25Q14CX7 972 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 CLPPQ16740 277 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 SLC9B1Q4ZJI4 515 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 DGLUCYQ7Z3D6 616 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 CARFQ8N187 725 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 UBE2E3Q969T4 207 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 DPYSL5Q9BPU6 564 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 EBF4Q9BQW3 602 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 ACPTQ9BZG2 426 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 PITHD1Q9GZP4 211 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 WDR55Q9H6Y2 383 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 GIMAP2Q9UG22 337 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 CCL27Q9Y4X3 112 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 CNOT1A5YKK6 2376 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 ATP6AP2A0A1C7CYW4 349 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 ATP6AP2O75787 350 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 CHEK2O96017 543 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 ALOX15P16050 662 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 NELFEP18615 380 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 MLLT3P42568 568 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 RPS13P62277 151 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 RELAQ04206 551 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 PHF19Q5T6S3 580 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 Q6ZSR9 355 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 CPLX4Q7Z7G2 160 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 REPS1Q96D71 796 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 C19orf60Q96EN9 201 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 FAR2Q96K12 515 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 ELAC2Q9BQ52 826 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 TRIM55Q9BYV6 548 aa24.8■■□□□ 1.56
RHBDD3-203ENST00000413137 AICDAQ9GZX7 198 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms