RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 VPREB1P12018 145 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 UCNP55089 124 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 RIPK4P57078 832 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 POLR2LP62875 67 aaKnown RBP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 SRSF9Q13242 221 aaKnown RBP eCLIP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 MAMLD1Q13495 774 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 NONOQ15233 471 aaKnown RBP eCLIP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 PHKG1Q16816 387 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 KNOP1Q1ED39 458 aaKnown RBP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 FAM182AQ5T1J6 154 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 LINC00242Q5T6M2 205 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 DHRS7BQ6IAN0 325 aaPredicted RBP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 CGB2Q6NT52 195 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 CYB5D1Q6P9G0 228 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 TMEM154Q6P9G4 183 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 EMBQ6PCB8 327 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 RPLP0P6Q8NHW5 317 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 SFXN2Q96NB2 322 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 MS4A10Q96PG2 267 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 HES7Q9BYE0 225 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 TMX4Q9H1E5 349 aaPredicted RBP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 DNAJC4Q9NNZ3 241 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 SUCLA2Q9P2R7 463 aaPredicted RBP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 ELF5Q9UKW6 265 aaPredicted RBP0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 NME7Q9Y5B8 376 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 CDC42BPBQ9Y5S2 1711 aa0.94□□□□□ -2.26
RNU2-55P-201ENST00000411146 MYO10Q9HD67 2058 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 IGSF1Q8N6C5 1336 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 PI4KAP2A4QPH2 592 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 TRIM49BA6NDI0 452 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 PGPEP1LA6NFU8 196 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 AGAP14A8MT82 685 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 B4DLN1 442 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 C2CD4DB7Z1M9 353 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 TRIM77I1YAP6 450 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 TRAFD1O14545 582 aaPredicted RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 SPRY1O43609 319 aaPredicted RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 CYTIPO60759 359 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 HCKP08631 526 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 F3P13726 295 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 IRF2P14316 349 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 CD22P20273 847 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 ARL3P36405 182 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 MATKP42679 507 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 ARSEP51690 589 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 MRPL12P52815 198 aaKnown RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 CLDN15P56746 228 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 ERVK-16P61578 105 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 KLC1Q07866 573 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 SGCGQ13326 291 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 PCLAFQ15004 111 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 MLF2Q15773 248 aaPredicted RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 UPP1Q16831 310 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 TMEM266Q2M3C6 531 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 ZNF506Q5JVG8 444 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 MARC1Q5VT66 337 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 MCM10Q7L590 875 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 CPEB2Q7Z5Q1 589 aaKnown RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 SLC22A15Q8IZD6 547 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 AVL9Q8NBF6 648 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 METTL21AQ8WXB1 218 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 SPACA9Q96E40 222 aaPredicted RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 TBATAQ96M53 351 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 PSMB7Q99436 277 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 CDCA3Q99618 268 aaPredicted RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 SDHCQ99643 169 aaPredicted RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 DEFB126Q9BYW3 111 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 MMP27Q9H306 513 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 SMARCAD1Q9H4L7 1026 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 WDR41Q9HAD4 459 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 RAVER2Q9HCJ3 691 aaKnown RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 OLA1Q9NTK5 396 aaKnown RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 CRNNQ9UBG3 495 aaPredicted RBP0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 CLEC4EQ9ULY5 219 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 TMEM98Q9Y2Y6 226 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 SELENOKQ9Y6D0 94 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 RPS6KL1Q9Y6S9 549 aa0.93□□□□□ -2.26
RNU2-55P-201ENST00000411146 TRAV9-2A0A087WT02 112 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 TRBV5-4A0A0C4DH59 114 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 A8MU76 341 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 SLC1A7O00341 560 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 DOK2O60496 412 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 LRP3O75074 770 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 ATP6AP2O75787 350 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 KRT33AO76009 404 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 GSRP00390 522 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 SERPING1P05155 500 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 CD1DP15813 335 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 GJA1P17302 382 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 AADACP22760 399 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 MAN1A1P33908 653 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 NRIP1P48552 1158 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 PPIAP62937 165 aaKnown RBP0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 SRPXP78539 464 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 OPCMLQ14982 345 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 CCL14Q16627 93 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 FAM106AQ4KMX7 169 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 ATP1A1-AS1Q5TC04 95 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 C6orf163Q5TEZ5 329 aa0.92□□□□□ -2.26
RNU2-55P-201ENST00000411146 CCDC30Q5VVM6 783 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms