RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 LIPJQ5W064 366 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 GRHL2Q6ISB3 625 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 KRT78Q8N1N4 520 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 ANKRD53Q8N9V6 530 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 OR4F6Q8NGB9 312 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 OR1L3Q8NH93 324 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 N4BP2L2Q92802 583 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-209ENST00000410038 PRR11Q96HE9 360 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-209ENST00000410038 CNDP1Q96KN2 507 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 ZNF382Q96SR6 550 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 POLR1BQ9H9Y6 1135 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 SLC39A1Q9NY26 324 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 ZNF490Q9ULM2 529 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-209ENST00000410038 PCDHGA4Q9Y5G9 962 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 AHCTF1Q8WYP5 2266 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 FER1L5A0AVI2 2057 aa13.73□□□□□ -0.21
LIMS2-209ENST00000410038 H0YGG7 62 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 NPHS1O60500 1241 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 SRPX2O60687 465 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 FGF5P12034 268 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 CHN1P15882 459 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 BGNP21810 368 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 HNF4AP41235 474 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 VSX2P58304 361 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ERVPABLB-1P60509 514 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ARF3P61204 181 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 IL11RAQ14626 422 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 RBBP5Q15291 538 aaKnown RBP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 CHI3L2Q15782 390 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 CES4AQ5XG92 561 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 LETMD1Q6P1Q0 360 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 VN1R4Q7Z5H5 301 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 MILR1Q7Z6M3 343 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 SYVN1Q86TM6 617 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 TBC1D19Q8N5T2 526 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 MFSD9Q8NBP5 474 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 AGAP11Q8TF27 550 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 PMEPA1Q969W9 287 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ZNF285Q96NJ3 590 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 CTRCQ99895 268 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 TRMOQ9BU70 441 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 PITHD1Q9GZP4 211 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 NT5DC2Q9H857 520 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 FANCEQ9HB96 536 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 RARRES3Q9UL19 164 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 STK38LQ9Y2H1 464 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 PCDHGA8Q9Y5G5 932 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 SCN3AQ9NY46 2000 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 FRYQ5TBA9 3013 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 C1QTNF9BB2RNN3 333 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 OR4F21O95013 312 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 SERPINE1P05121 402 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 NEFHP12036 1026 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ARRB2P32121 409 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 PKNOX1P55347 436 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 GABREP78334 506 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 RCN2Q14257 317 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 CPSF6Q16630 551 aaKnown RBP eCLIP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 HIST2H2ACQ16777 129 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 GGTA1PQ4G0N0 100 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 SDK2Q58EX2 2172 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 HIST2H2AA3Q6FI13 130 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ADNP2Q6IQ32 1131 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 CYB5D1Q6P9G0 228 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ATG14Q6ZNE5 492 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 GPRIN3Q6ZVF9 776 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 PPP1R3BQ86XI6 285 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 LSMEM2Q8N112 164 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 OR7G3Q8NG95 312 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 OR8K5Q8NH50 307 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 PPP1R14CQ8TAE6 165 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 TM4SF19Q96DZ7 209 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 TAAR9Q96RI9 348 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 SPRTNQ9H040 489 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-209ENST00000410038 DRC3Q9H069 523 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 MID1IP1Q9NPA3 183 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 STARD5Q9NSY2 213 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ZFP69BQ9UJL9 534 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 SERTAD3Q9UJW9 196 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 ZMIZ1Q9ULJ6 1067 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 AP1M2Q9Y6Q5 423 aa13.72□□□□□ -0.21
LIMS2-209ENST00000410038 H0YIV9 168 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 OR2B3O76000 313 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 TNFSF15O95150 251 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 ESRRBO95718 433 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 STATHP02808 62 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 EIF2S1P05198 315 aaKnown RBP13.71□□□□□ -0.21
LIMS2-209ENST00000410038 CHRNGP07510 517 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 AHRP35869 848 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 ITGA1P56199 1179 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 RAB15P59190 212 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 ZRSR2Q15696 482 aaKnown RBP13.71□□□□□ -0.21
LIMS2-209ENST00000410038 ARL13AQ5H913 290 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-209ENST00000410038 TCTE1Q5JU00 501 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 WASHC2DQ5SRD0 308 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 DCAF12Q5T6F0 453 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 FAM219BQ5XKK7 198 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms